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RPS27A
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  • RPS27A
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1328.6 nTPM
HPA:847.3 nTPM
GTEx:1328.6 nTPM
FANTOM5:27.3 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041344Antibody HPA049132Antibody CAB033319
Glandular cells MediumHighLow







SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 847.3
overview
Male, age 65
Small intestine sample 232
nTPM: 1051.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 807.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 764.3
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 766

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1328.6
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1328.6
Samples: 187

Max nTPM: 3359.6
Min nTPM: 722.0
Std nTPM: 444.3
Median nTPM: 1254.3
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 3359.6
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2984.6
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2652.1
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 2569.3
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2492.2
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 2479.5
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2476.5
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2411.8
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 2358.8
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2263.4
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2229.9
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 2057.6
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 2057.6
GTEX-183FY-1626-SM-793D8 20-29 years, male 2055.2
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 2011.5
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1979.2
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1922.9
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1898.9
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1898.2
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1823.8
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1816.2
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1780.7
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1776.4
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1762.0
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1729.2
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1678.5
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1677.0
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1666.8
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1654.6
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1650.0
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1649.8
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1633.5
GTEX-1C475-1426-SM-793CH 40-49 years, female 1633.0
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1617.3
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1613.1
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1606.9
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1600.2
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1599.0
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1595.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1588.6
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1579.1
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1577.9
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1575.1
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1570.6
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1567.0
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1558.6
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1552.4
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1546.1
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1539.5
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1536.1
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1514.6
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1509.3
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1507.9
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1490.1
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1483.1
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1468.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1464.2
GTEX-1192X-2526-SM-59868 50-59 years, male 1458.5
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1454.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1453.1
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1446.7
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1446.4
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1435.7
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1435.3
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1433.8
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1430.6
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1411.5
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1395.6
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1380.4
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1376.3
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1367.7
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1367.2
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1354.9
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1352.9
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1348.8
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1347.7
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1331.3
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1319.3
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1317.0
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1314.8
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1307.2
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1303.7
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1301.1
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1300.8
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1300.6
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1292.0
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1287.3
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1285.5
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1268.0
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1267.6
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1266.4
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1265.7
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1254.5
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1254.3
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1221.1
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1213.4
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1212.5
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1200.4
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1199.5
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1197.7
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1189.6
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1188.8
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1185.7
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1183.2
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1180.2
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1173.9
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1173.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1165.9
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1165.1
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1155.5
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1146.1
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1145.8
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1144.5
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1144.3
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1137.9
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1137.5
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1132.8
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1132.4
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1122.0
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1120.5
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1117.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1115.2
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1105.8
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1097.9
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1092.4
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1089.1
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1088.9
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1084.4
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1076.1
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1073.8
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1060.3
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1057.8
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1050.8
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1048.3
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1040.8
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1037.3
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1037.2
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1035.3
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1032.4
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1028.4
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1028.1
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1020.2
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1018.4
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1014.9
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1009.1
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1007.7
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 996.3
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 987.2
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 968.0
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 964.0
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 962.2
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 961.0
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 957.7
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 953.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 931.4
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 924.5
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 924.4
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 916.8
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 907.7
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 897.3
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 893.0
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 890.4
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 888.0
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 887.3
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 886.3
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 882.3
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 873.5
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 873.4
GTEX-1122O-1326-SM-5H11F 60-69 years, female 867.0
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 853.1
GTEX-14PN3-2026-SM-68729 60-69 years, female 852.7
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 844.8
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 835.8
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 821.7
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 813.0
GTEX-YFCO-1326-SM-664NV 40-49 years, male 801.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 795.6
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 790.3
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 769.2
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 765.8
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 764.8
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 755.8
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 749.6
GTEX-111YS-1426-SM-5GID8 60-69 years, male 745.3
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 732.4
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 726.8
GTEX-ZTSS-0926-SM-59865 40-49 years, male 722.0
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 27.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 27.3
FF:10024-101D6 15,40,85 years, mixed 27.3

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