We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPS27A
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • RPS27A
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1694.7 nTPM
GTEx:1694.7 nTPM
FANTOM5:28.7 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041344Antibody HPA049132Antibody CAB033319
Squamous epithelial cells HighHighMedium






VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1694.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 1694.7
Samples: 156

Max nTPM: 4868.9
Min nTPM: 880.0
Std nTPM: 510.8
Median nTPM: 1614.9
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 4868.9
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 3435.4
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 3043.8
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 3018.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 2705.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 2679.1
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 2620.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 2588.7
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 2464.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 2457.8
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 2442.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 2413.4
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 2349.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 2311.1
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 2307.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 2296.5
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 2276.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 2264.9
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 2244.4
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 2203.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 2201.8
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 2195.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 2176.4
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 2171.3
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2158.2
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 2128.3
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 2106.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 2074.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 2073.2
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 2073.0
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 2015.6
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 2015.4
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 2013.7
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1971.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1946.8
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 1945.1
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 1923.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1920.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1911.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1889.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 1884.9
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1877.1
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1865.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1861.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 1855.4
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1845.8
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1840.1
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1830.0
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1822.4
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1820.7
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1818.8
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1790.4
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1786.6
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1782.1
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 1779.9
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1778.5
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 1776.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 1775.5
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1774.6
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1771.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1752.7
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1750.9
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 1743.9
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1742.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1738.1
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 1735.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1716.3
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1715.4
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 1710.9
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 1682.9
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1681.8
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1674.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 1660.2
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1652.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1627.2
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1625.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1625.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1623.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1605.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1605.6
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 1603.3
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 1595.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1590.9
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 1578.5
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 1578.3
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1562.1
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1548.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1534.5
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1526.6
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 1492.6
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1486.1
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 1457.0
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1456.8
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1452.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 1443.6
GTEX-QCQG-1226-SM-48U23 50-59 years, female 1439.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 1435.4
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 1433.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1429.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1428.0
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 1418.0
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 1411.2
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1409.6
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1408.0
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1405.8
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 1393.9
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1390.7
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1381.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1381.5
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1376.8
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1373.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1371.8
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 1346.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1341.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1334.2
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 1328.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1319.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 1306.8
GTEX-S341-1226-SM-4AD5S 40-49 years, female 1304.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1302.6
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 1302.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1287.5
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 1287.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1285.9
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1285.9
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1282.6
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1280.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1279.8
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1278.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1273.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1273.3
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 1273.0
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 1265.0
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1255.8
GTEX-11I78-2026-SM-5987C 50-59 years, female 1252.2
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 1245.5
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1242.1
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1237.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 1235.8
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1233.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 1226.9
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1205.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1204.1
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1196.3
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 1160.8
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1157.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1144.9
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1142.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 1122.2
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 1121.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1093.9
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1090.4
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1052.3
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 989.2
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 937.0
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 880.0
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 28.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 28.7
FF:10204-103F6 68 years, female 28.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.