HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:43.8 nTPM
HPA:43.8 nTPM
GTEx:49.9 nTPM
FANTOM5:17.0 Scaled Tags Per Million
Pig:13.0 nTPM
Mouse:12.0 nTPM
Allen mouse:17.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.8
Sample id Sample description nTPM
Hippocampus
nTPM: 43.8
2148 Female, age 91, left hemisphere 46.7
2529 Female, age 94, left hemisphere 46.6
1898 Male, age 80, left hemisphere 46.4
1911 Female, age 85, right hemisphere 46.1
1855 Male, age 76, left hemisphere 38.7
2621 Female, age 67, right hemisphere 38.1
Dentate gyrus
nTPM: 42.5
2530 Female, age 94, left hemisphere 48.8
2528 Male, age 74, both hemispheres 48.3
1927 Female, age 91, both hemispheres 41.1
2010 Male, age 76, both hemispheres 41.0
2531 Female, age 67, both hemispheres 38.5
2246 Female, age 85, both hemispheres 37.2
Entorhinal gyrus
nTPM: 42.2
2117 Female, age 91, right hemisphere 47.9
1938 Female, age 85, left hemisphere 43.3
1787 Male, age 76, left hemisphere 42.5
2764 Male, age 80, right hemisphere 42.4
2686 Male, age 75, right hemisphere 40.0
2613 Female, age 94, left hemisphere 36.9
Hippocampus, CA1
nTPM: 39.0
1873 Female, age 85, both hemispheres 42.3
2527 Male, age 74, both hemispheres 39.4
2082 Female, age 91, right hemisphere 38.6
2749 Male, age 80, left hemisphere 38.3
2045 Male, age 76, both hemispheres 36.6
Hippocampus, CA2
nTPM: 40.9
1963 Male, age 80, left hemisphere 48.8
2249 Male, age 74, both hemispheres 42.0
1940 Female, age 85, left hemisphere 40.4
2113 Female, age 91, right hemisphere 39.6
2437 Female, age 94, left hemisphere 39.1
1892 Male, age 76, both hemispheres 35.5
Hippocampus, CA3
nTPM: 40.4
2861 Female, age 67, both hemispheres 49.7
2620 Female, age 94, left hemisphere 42.9
1891 Female, age 85, both hemispheres 41.3
1867 Male, age 76, both hemispheres 39.0
2137 Male, age 80, left hemisphere 35.2
2436 Male, age 74, both hemispheres 34.1
Parahippocampal cortex
nTPM: 37.9
1933 Female, age 85, both hemispheres 40.9
1990 Female, age 91, right hemisphere 40.7
2692 Male, age 74, both hemispheres 39.3
2018 Male, age 76, both hemispheres 39.2
2532 Female, age 72, left hemisphere 38.0
2245 Female, age 91, both hemispheres 37.9
2622 Female, age 67, right hemisphere 37.8
1850 Male, age 80, both hemispheres 36.1
2250 Female, age 67, right hemisphere 35.4
2693 Female, age 94, both hemispheres 34.1
Perirhinal gyrus
nTPM: 35.2
1794 Male, age 80, right hemisphere 37.8
1847 Female, age 91, left hemisphere 36.9
2521 Female, age 94, right hemisphere 35.1
2848 Male, age 76, right hemisphere 33.6
1841 Female, age 85, right hemisphere 32.7
Subiculum
nTPM: 39.9
2729 Female, age 91, right hemisphere 43.0
1901 Male, age 80, both hemispheres 41.7
2042 Male, age 76, both hemispheres 40.8
1977 Female, age 85, both hemispheres 40.5
2619 Male, age 74, both hemispheres 39.9
2438 Female, age 94, left hemisphere 33.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.9
Samples: 197

Max nTPM: 137.7
Min nTPM: 13.1
Std nTPM: 19.9
Median nTPM: 45.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 137.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 115.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 112.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 109.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 99.8
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 96.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 96.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 92.0
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 91.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 88.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 87.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.0
FF:10153-102I9 76 years, female 23.5
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 14.1
Min nTPM: 9.5
Sample A Female 14.1
Sample B Female 11.3
Sample C Male 10.1
Sample D Male 9.5
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 14.6
Min nTPM: 8.9
Sample A Female 9.1
Sample B Female 8.9
Sample C Male 14.6
Sample D Male 9.1
Subiculum
nTPM: 13.0
Samples: 4

Max nTPM: 19.0
Min nTPM: 10.6
Sample A Female 19.0
Sample B Female 11.5
Sample C Male 10.6
Sample D Male 10.8
Ventral hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.1
Sample A Female 10.3
Sample B Female 8.1
Sample C Male 12.7
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 13.5
Min nTPM: 9.4
Sample A Male 12.3
Sample B Male 9.4
Sample C Female 12.8
Sample D Female 13.5
Hippocampal formation
nTPM: 10.6
Samples: 4

Max nTPM: 11.5
Min nTPM: 8.7
Sample A Male 11.5
Sample B Male 8.7
Sample C Female 11.1
Sample D Female 10.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
1505 Antisense, RP_040420_01_E06, Mouse strain C57BL/6J (56 days, male) 17.4
1504 Antisense, RP_040420_01_E06, Mouse strain C57BL/6J (56 days, male) 8.0

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