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RPS3A
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM EPIDIDYMIS
ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:877.1 nTPM
FANTOM5:31.5 Scaled Tags Per Million
Pig:51.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA047100
Glial cells Not detected
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 877.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 877.1
Samples: 246

Max nTPM: 2573.4
Min nTPM: 479.2
Std nTPM: 287.2
Median nTPM: 814.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2573.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2078.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1952.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1892.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1831.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1783.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1780.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1530.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1517.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1509.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1492.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1411.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1399.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1396.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1379.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1356.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1308.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1297.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1284.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1270.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1249.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1218.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1209.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1207.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1204.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1203.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1185.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1133.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1122.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1120.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1114.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1111.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1100.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1097.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1089.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1086.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1080.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1069.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1063.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1058.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1053.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1051.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1047.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1042.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1042.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1041.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1040.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1038.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1037.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1026.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1025.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1022.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1021.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1017.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1013.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1010.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1007.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1005.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1004.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1000.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 998.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 994.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 989.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 987.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 987.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 984.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 977.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 972.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 970.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 965.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 963.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 962.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 961.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 956.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 952.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 950.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 950.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 947.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 946.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 945.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 941.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 941.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 939.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 938.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 936.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 935.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 934.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 930.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 923.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 918.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 909.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 907.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 904.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 900.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 897.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 890.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 889.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 882.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 872.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 869.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 867.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 865.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 864.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 860.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 858.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 857.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 855.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 855.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 850.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 850.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 847.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 846.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 839.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 836.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 835.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 826.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 824.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 824.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 823.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 823.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 818.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 814.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 814.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 813.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 812.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 799.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 795.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 788.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 786.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 785.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 784.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 782.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 782.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 778.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 778.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 774.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 771.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 769.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 767.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 765.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 762.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 761.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 758.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 757.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 756.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 751.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 745.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 745.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 744.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 742.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 742.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 740.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 739.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 738.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 736.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 731.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 731.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 730.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 730.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 727.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 725.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 721.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 719.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 716.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 713.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 712.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 712.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 712.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 708.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 707.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 706.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 705.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 704.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 702.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 702.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 700.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 699.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 699.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 697.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 692.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 692.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 689.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 689.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 683.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 682.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 679.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 679.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 674.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 673.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 671.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 671.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 669.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 663.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 663.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 662.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 660.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 658.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 657.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 656.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 655.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 653.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 651.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 650.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 649.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 648.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 646.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 645.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 644.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 643.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 641.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 639.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 637.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 631.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 630.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 627.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 627.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 626.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 625.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 621.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 617.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 610.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 608.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 608.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 607.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 604.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 604.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 603.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 588.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 588.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 582.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 582.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 581.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 581.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 578.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 574.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 571.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 562.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 560.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 559.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 557.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 550.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 544.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 541.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 535.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 513.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 479.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 31.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 31.5
FF:10164-103B2 76 years, female 31.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 51.0
Pig sample Sample description nTPM
Caudate
nTPM: 51.0
Samples: 4

Max nTPM: 55.5
Min nTPM: 44.8
Sample A Female 55.5
Sample B Female 52.3
Sample C Male 51.2
Sample D Male 44.8

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