HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:144.0 nTPM
HPA:144.0 nTPM
GTEx:125.0 nTPM
FANTOM5:213.9 Scaled Tags Per Million
Pig:98.7 nTPM
Mouse:6.6 nTPM
Allen mouse:5.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051300Antibody HPA054630
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 144.0
Sample id Sample description nTPM
Hippocampus
nTPM: 143.6
1911 Female, age 85, right hemisphere 165.2
2529 Female, age 94, left hemisphere 155.7
2148 Female, age 91, left hemisphere 146.0
1898 Male, age 80, left hemisphere 136.9
1855 Male, age 76, left hemisphere 132.4
2621 Female, age 67, right hemisphere 125.6
Dentate gyrus
nTPM: 138.4
2530 Female, age 94, left hemisphere 175.7
2528 Male, age 74, both hemispheres 163.5
2010 Male, age 76, both hemispheres 128.8
2531 Female, age 67, both hemispheres 128.6
2246 Female, age 85, both hemispheres 125.9
1927 Female, age 91, both hemispheres 107.7
Entorhinal gyrus
nTPM: 129.8
2117 Female, age 91, right hemisphere 173.3
2686 Male, age 75, right hemisphere 149.2
2764 Male, age 80, right hemisphere 129.0
2613 Female, age 94, left hemisphere 115.1
1938 Female, age 85, left hemisphere 109.4
1787 Male, age 76, left hemisphere 102.6
Hippocampus, CA1
nTPM: 119.8
1873 Female, age 85, both hemispheres 150.8
2527 Male, age 74, both hemispheres 136.3
2082 Female, age 91, right hemisphere 122.7
2749 Male, age 80, left hemisphere 95.1
2045 Male, age 76, both hemispheres 94.3
Hippocampus, CA2
nTPM: 128.8
1963 Male, age 80, left hemisphere 169.9
2113 Female, age 91, right hemisphere 133.6
2249 Male, age 74, both hemispheres 132.8
2437 Female, age 94, left hemisphere 129.3
1940 Female, age 85, left hemisphere 118.5
1892 Male, age 76, both hemispheres 88.8
Hippocampus, CA3
nTPM: 119.3
1891 Female, age 85, both hemispheres 164.5
2620 Female, age 94, left hemisphere 130.4
2861 Female, age 67, both hemispheres 128.4
1867 Male, age 76, both hemispheres 103.1
2436 Male, age 74, both hemispheres 99.7
2137 Male, age 80, left hemisphere 89.5
Parahippocampal cortex
nTPM: 106.4
2692 Male, age 74, both hemispheres 136.5
1990 Female, age 91, right hemisphere 119.0
2532 Female, age 72, left hemisphere 115.1
2245 Female, age 91, both hemispheres 108.5
2018 Male, age 76, both hemispheres 106.6
2622 Female, age 67, right hemisphere 105.1
1850 Male, age 80, both hemispheres 104.6
1933 Female, age 85, both hemispheres 98.4
2693 Female, age 94, both hemispheres 88.2
2250 Female, age 67, right hemisphere 82.4
Perirhinal gyrus
nTPM: 84.3
1794 Male, age 80, right hemisphere 87.4
1847 Female, age 91, left hemisphere 86.5
2848 Male, age 76, right hemisphere 85.9
2521 Female, age 94, right hemisphere 81.8
1841 Female, age 85, right hemisphere 79.8
Subiculum
nTPM: 144.0
2042 Male, age 76, both hemispheres 160.0
2729 Female, age 91, right hemisphere 153.6
1901 Male, age 80, both hemispheres 149.8
2438 Female, age 94, left hemisphere 143.1
2619 Male, age 74, both hemispheres 128.9
1977 Female, age 85, both hemispheres 128.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 125.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 125.0
Samples: 197

Max nTPM: 381.0
Min nTPM: 24.0
Std nTPM: 61.1
Median nTPM: 113.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 381.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 324.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 319.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 295.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 288.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 284.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 263.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 246.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 238.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 238.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 236.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 213.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 213.9
FF:10153-102I9 76 years, female 215.4
FF:10169-103B7 60 years, female 212.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 98.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 98.7
Samples: 4

Max nTPM: 135.0
Min nTPM: 46.2
Sample A Female 133.8
Sample B Female 79.9
Sample C Male 135.0
Sample D Male 46.2
Entorhinal cortex
nTPM: 46.2
Samples: 4

Max nTPM: 48.0
Min nTPM: 44.6
Sample A Female 46.2
Sample B Female 48.0
Sample C Male 44.6
Sample D Male 46.0
Subiculum
nTPM: 56.5
Samples: 4

Max nTPM: 64.8
Min nTPM: 49.3
Sample A Female 62.3
Sample B Female 64.8
Sample C Male 49.3
Sample D Male 49.7
Ventral hippocampus
nTPM: 77.2
Samples: 4

Max nTPM: 93.1
Min nTPM: 52.5
Sample A Female 75.5
Sample B Female 52.5
Sample C Male 87.6
Sample D Male 93.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.6
Samples: 4

Max nTPM: 8.5
Min nTPM: 5.3
Sample A Male 8.5
Sample B Male 6.4
Sample C Female 6.3
Sample D Female 5.3
Hippocampal formation
nTPM: 6.4
Samples: 4

Max nTPM: 7.9
Min nTPM: 5.3
Sample A Male 6.2
Sample B Male 5.3
Sample C Female 6.2
Sample D Female 7.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.6
74511880 Antisense, RP_051121_04_A01, Mouse strain C57BL/6J (56 days, male) 6.9
68667288 Antisense, RP_050201_02_A02, Mouse strain C57BL/6J (56 days, male) 4.3

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The Human Protein Atlas

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