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TMEM219
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:246.7 nTPM
HPA:246.7 nTPM
GTEx:241.1 nTPM
FANTOM5:34.3 Scaled Tags Per Million
Mouse:26.2 nTPM
Allen mouse:0.1 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 246.7
Sample id Sample description nTPM
Amygdala
nTPM: 241.9
2695 Female, age 67, right hemisphere 248.9
2517 Female, age 94, left hemisphere 243.3
2514 Male, age 75, right hemisphere 243.2
1987 Female, age 91, left hemisphere 238.7
2814 Male, age 76, right hemisphere 235.3
Basal amygdala
nTPM: 241.2
2609 Male, age 75, right hemisphere 255.9
2827 Female, age 67, right hemisphere 242.9
2685 Female, age 94, left hemisphere 239.1
2110 Male, age 80, left hemisphere 238.5
2243 Female, age 91, right hemisphere 237.4
1955 Male, age 76, both hemispheres 233.6
Central amygdala
nTPM: 245.8
2826 Female, age 94, left hemisphere 270.5
2515 Male, age 75, right hemisphere 253.5
2239 Male, age 80, left hemisphere 236.5
2701 Female, age 91, right hemisphere 235.0
1905 Male, age 76, both hemispheres 233.3
Corticomedial amygdala
nTPM: 236.3
2428 Male, age 75, right hemisphere 250.2
2829 Male, age 80, left hemisphere 242.1
2242 Female, age 91, right hemisphere 235.3
2535 Female, age 67, right hemisphere 233.0
2429 Female, age 94, left hemisphere 230.3
2240 Male, age 76, both hemispheres 227.0
Lateral amygdala
nTPM: 246.7
2830 Female, age 67, right hemisphere 258.7
2516 Male, age 75, right hemisphere 254.7
2534 Female, age 94, left hemisphere 252.4
2256 Male, age 80, left hemisphere 242.7
2255 Female, age 91, right hemisphere 238.7
1883 Male, age 76, both hemispheres 232.9
Stria terminalis, bed nucleus
nTPM: 226.7
1974 Female, age 91, both hemispheres 228.2
2201 Male, age 74, unknown 228.0
2486 Female, age 94, both hemispheres 224.0

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 241.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 241.1
Samples: 152

Max nTPM: 576.2
Min nTPM: 110.2
Std nTPM: 80.9
Median nTPM: 225.5
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 576.2
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 523.1
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 452.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 425.8
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 412.3
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 412.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 406.6
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 400.3
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 390.9
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 387.6
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 378.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 377.4
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 368.6
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 364.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 362.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 356.7
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 356.3
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 354.0
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 344.3
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 338.3
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 332.8
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 332.4
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 324.5
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 324.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 319.4
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 312.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 305.8
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 305.0
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 302.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 302.7
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 302.4
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 299.7
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 294.1
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 291.8
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 290.9
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 285.8
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 281.7
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 280.5
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 278.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 278.5
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 276.5
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 276.3
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 276.1
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 275.9
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 275.4
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 270.4
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 267.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 263.4
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 260.8
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 259.8
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 257.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 253.5
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 253.1
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 251.7
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 251.2
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 250.5
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 247.0
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 245.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 245.1
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 241.9
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 241.6
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 236.3
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 236.1
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 235.8
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 235.2
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 234.9
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 234.5
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 232.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 230.7
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 230.2
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 229.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 229.9
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 227.5
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 227.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 226.9
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 226.2
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 224.8
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 224.3
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 222.2
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 219.1
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 218.4
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 217.8
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 216.6
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 214.8
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 213.5
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 212.9
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 210.5
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 209.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 209.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 209.1
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 208.8
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 208.7
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 208.5
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 206.7
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 206.7
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 206.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 204.3
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 201.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 201.0
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 200.3
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 198.5
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 192.5
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 189.0
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 188.4
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 186.1
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 185.9
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 185.7
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 183.9
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 183.5
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 182.8
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 182.8
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 181.3
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 181.0
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 179.0
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 178.9
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 178.7
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 178.7
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 177.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 174.9
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 174.3
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 173.1
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 172.2
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 171.1
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 169.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 168.6
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 167.7
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 167.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 165.9
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 165.0
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 165.0
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 164.4
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 164.2
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 164.0
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 163.6
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 162.0
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 160.5
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 159.1
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 158.6
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 157.3
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 156.6
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 154.5
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 152.1
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 149.3
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 145.4
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 145.1
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 143.6
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 142.2
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 138.3
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 134.7
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 126.6
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 125.9
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 110.2
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 34.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 34.3
FF:10151-102I7 76 years, female 34.3

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 26.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 26.2
Samples: 4

Max nTPM: 30.0
Min nTPM: 20.8
Sample A Male 20.8
Sample B Male 26.2
Sample C Female 30.0
Sample D Female 27.9

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.1
68080705 Antisense, RP_040929_01_G04, Mouse strain C57BL/6J (56 days, male) 0.1

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