PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:688.6 nTPM
HPA:688.6 nTPM
FANTOM5:774.1 Scaled Tags Per Million
Pig:233.6 nTPM
Mouse:721.0 nTPM
Allen mouse:14.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 688.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 518.8
2188 Female, age 91, both hemispheres 577.1
2090 Male, age 80, both hemispheres 568.4
1984 Male, age 76, both hemispheres 470.1
2301 Female, age 85, both hemispheres 459.4
Area postrema
nTPM: 599.5
2306 Male, age 80, both hemispheres 675.5
2799 Male, age 61, both hemispheres 657.2
2054 Male, age 76, both hemispheres 465.8
Cuneate nuclei
nTPM: 616.2
2376 Male, age 61, both hemispheres 680.6
2381 Male, age 80, both hemispheres 620.3
2131 Male, age 76, both hemispheres 547.9
Dorsal cochlear nucleus
nTPM: 633.5
2802 Male, age 74, right hemisphere 701.7
2378 Male, age 80, both hemispheres 676.7
2370 Male, age 61, both hemispheres 639.2
2058 Male, age 76, both hemispheres 612.2
2187 Female, age 91, both hemispheres 537.4
Dorsal medullary reticular nucleus
nTPM: 616.6
2373 Male, age 61, both hemispheres 640.5
2040 Female, age 85, both hemispheres 631.1
2088 Male, age 76, both hemispheres 578.2
Dorsal motor vagal complex
nTPM: 559.0
2797 Male, age 61, both hemispheres 730.3
2133 Female, age 91, both hemispheres 634.3
2185 Male, age 76, both hemispheres 615.8
2000 Male, age 74, unknown 559.2
2643 Male, age 74, both hemispheres 534.7
2807 Female, age 85, both hemispheres 486.8
2844 Male, age 55, unknown 480.5
2813 Female, age 72, unknown 430.4
Dorsal tegmental nucleus
nTPM: 549.9
2083 Male, age 80, both hemispheres 673.1
2326 Male, age 74, both hemispheres 575.9
1936 Male, age 76, left hemisphere 486.9
2358 Male, age 61, both hemispheres 463.6
Dorsolateral tegmental area
nTPM: 530.8
2654 Male, age 80, both hemispheres 631.3
2751 Female, age 85, both hemispheres 622.0
2360 Male, age 74, both hemispheres 484.1
2337 Male, age 61, both hemispheres 473.4
2141 Male, age 76, both hemispheres 443.3
Gigantocellular reticular nuclei, medullary
nTPM: 663.0
2387 Female, age 91, both hemispheres 857.7
1876 Female, age 85, both hemispheres 641.5
2314 Male, age 61, both hemispheres 628.4
2310 Male, age 80, both hemispheres 626.7
2462 Male, age 74, both hemispheres 615.4
2022 Male, age 76, right hemisphere 608.3
Gigantocellular reticular nuclei, pars
nTPM: 582.1
2706 Male, age 80, both hemispheres 602.8
2336 Male, age 61, both hemispheres 586.7
2168 Male, age 76, both hemispheres 580.7
2330 Male, age 80, both hemispheres 579.3
2084 Female, age 85, both hemispheres 561.0
Inferior olive
nTPM: 570.7
2178 Male, age 61, both hemispheres 632.6
2628 Female, age 91, both hemispheres 622.7
2563 Male, age 74, both hemispheres 543.3
2085 Female, age 85, both hemispheres 542.6
2379 Male, age 80, both hemispheres 512.3
Kolliker-Fuse nucleus
nTPM: 560.4
2793 Female, age 91, left hemisphere 696.4
2163 Male, age 80, both hemispheres 561.8
2315 Male, age 76, right hemisphere 423.0
Lateral lemniscal nuclei
nTPM: 616.7
2453 Male, age 74, right hemisphere 688.2
2320 Female, age 91, left hemisphere 641.4
2169 Male, age 76, both hemispheres 605.8
2036 Male, age 80, both hemispheres 595.6
2746 Female, age 85, left hemisphere 552.7
Lateral medullary reticular nucleus
nTPM: 560.7
2044 Male, age 76, both hemispheres 605.1
2852 Male, age 80, both hemispheres 590.8
2374 Male, age 61, both hemispheres 581.2
2190 Female, age 85, both hemispheres 553.4
2804 Female, age 91, both hemispheres 527.9
2305 Male, age 74, both hemispheres 506.2
Lateral parabrachial nucleus
nTPM: 597.6
2013 Male, age 80, both hemispheres 632.1
2792 Male, age 76, both hemispheres 603.8
2790 Male, age 61, both hemispheres 597.7
2139 Female, age 85, right hemisphere 556.9
Lateral vestibular nucleus
nTPM: 532.5
2184 Male, age 76, both hemispheres 555.6
2311 Male, age 80, both hemispheres 509.5
Locus coeruleus
nTPM: 488.9
2162 Male, age 80, both hemispheres 513.9
2317 Female, age 72, unknown 506.6
2014 Male, age 55, unknown 499.7
2720 Male, age 74, both hemispheres 498.4
2123 Female, age 91, both hemispheres 484.4
1980 Male, age 76, both hemispheres 460.0
2788 Male, age 74, unknown 459.1
Medial olivary nucleus
nTPM: 574.1
1943 Male, age 61, both hemispheres 651.1
2851 Male, age 80, both hemispheres 582.8
2138 Female, age 91, both hemispheres 574.1
1962 Male, age 76, both hemispheres 488.3
Medial parabrachial nucleus
nTPM: 547.3
2463 Female, age 85, right hemisphere 600.3
2854 Male, age 80, both hemispheres 548.3
2156 Male, age 61, both hemispheres 544.3
2786 Male, age 76, both hemispheres 532.0
2170 Female, age 91, both hemispheres 511.6
Medial periolivary nuclei
nTPM: 607.5
2458 Female, age 91, both hemispheres 697.1
2081 Male, age 80, both hemispheres 627.3
2063 Male, age 76, both hemispheres 617.0
2171 Female, age 85, both hemispheres 557.3
2791 Male, age 74, right hemisphere 538.7
Medial vestibular nucleus
nTPM: 580.1
2803 Female, age 91, both hemispheres 720.0
2093 Male, age 80, both hemispheres 673.9
2624 Male, age 61, both hemispheres 600.1
2801 Male, age 74, both hemispheres 534.7
2134 Male, age 76, both hemispheres 485.6
2743 Female, age 85, both hemispheres 466.1
Motor facial nucleus
nTPM: 644.2
2795 Female, age 91, both hemispheres 724.9
2126 Male, age 61, both hemispheres 666.9
2327 Male, age 80, both hemispheres 631.4
2062 Male, age 76, both hemispheres 619.1
2365 Male, age 74, right hemisphere 617.4
2697 Female, age 85, both hemispheres 605.3
Motor hypoglossal nucleus
nTPM: 569.8
2125 Female, age 91, both hemispheres 707.8
2132 Female, age 85, both hemispheres 676.2
2182 Male, age 80, both hemispheres 536.4
2461 Male, age 61, both hemispheres 510.0
2277 Male, age 76, both hemispheres 418.5
Motor trigeminal nucleus
nTPM: 584.4
2560 Male, age 74, both hemispheres 669.7
2321 Female, age 91, both hemispheres 601.0
2079 Male, age 80, both hemispheres 583.3
2309 Male, age 76, both hemispheres 549.4
2335 Male, age 61, both hemispheres 518.3
Nuclei of the trapezoid body
nTPM: 624.0
2368 Female, age 91, both hemispheres 726.0
1983 Male, age 76, both hemispheres 629.5
2166 Male, age 80, both hemispheres 624.6
2159 Male, age 61, both hemispheres 608.2
2735 Female, age 85, both hemispheres 531.7
Nucleus ambiguus
nTPM: 605.7
2071 Male, age 76, both hemispheres 616.3
2096 Female, age 85, both hemispheres 595.0
Nucleus cuneatus
nTPM: 622.9
2562 Male, age 61, both hemispheres 643.5
2380 Male, age 80, both hemispheres 637.2
2805 Female, age 91, both hemispheres 621.0
2564 Male, age 74, both hemispheres 616.4
2100 Male, age 76, both hemispheres 612.1
2808 Female, age 85, both hemispheres 606.9
Nucleus gracilis
nTPM: 658.0
2382 Male, age 80, both hemispheres 778.1
2299 Female, age 85, both hemispheres 641.5
2627 Male, age 74, both hemispheres 554.3
Nucleus raphe magnus
nTPM: 659.8
2459 Female, age 91, both hemispheres 901.2
2328 Male, age 80, both hemispheres 679.6
2051 Male, age 76, both hemispheres 661.4
2160 Male, age 61, both hemispheres 587.3
2172 Female, age 85, both hemispheres 570.2
2455 Male, age 74, both hemispheres 559.0
Nucleus raphe obscurus
nTPM: 573.0
2800 Male, age 61, midline 644.5
2845 Female, age 85, midline 541.1
2142 Male, age 76, midline 533.3
Nucleus raphe pallidus
nTPM: 552.9
1924 Male, age 61, midline 642.6
2183 Male, age 80, midline 538.8
2145 Male, age 76, midline 477.1
Nucleus tractus solitarii
nTPM: 448.4
2656 Male, age 76, both hemispheres 477.7
2144 Female, age 91, right hemisphere 463.2
2307 Male, age 80, both hemispheres 435.3
2191 Female, age 85, both hemispheres 417.3
Paramedian reticular nucleus
nTPM: 597.8
2050 Female, age 85, both hemispheres 645.8
2057 Male, age 80, both hemispheres 623.8
2313 Male, age 61, both hemispheres 584.3
2052 Male, age 76, both hemispheres 537.5
Parvicellular reticular nuclei
nTPM: 599.1
2558 Male, age 74, both hemispheres 633.4
2095 Male, age 76, both hemispheres 598.9
2119 Male, age 80, both hemispheres 564.9
Parvicellular reticular nuclei, medullary
nTPM: 592.8
2189 Female, age 91, both hemispheres 607.0
2091 Female, age 85, both hemispheres 595.1
2181 Male, age 80, left hemisphere 576.4
Peritrigeminal nucleus
nTPM: 561.4
2179 Male, age 61, both hemispheres 586.9
2136 Male, age 76, both hemispheres 580.6
2067 Female, age 85, both hemispheres 516.7
Pontine nuclei
nTPM: 638.6
2454 Male, age 74, left hemisphere 711.2
2727 Male, age 61, right hemisphere 698.0
1863 Male, age 55, unknown 660.0
1968 Male, age 76, left hemisphere 658.3
2787 Female, age 85, both hemispheres 649.3
2109 Female, age 72, unknown 580.4
2115 Male, age 80, left hemisphere 578.2
2319 Female, age 91, both hemispheres 573.1
Pontine raphe nucleus
nTPM: 559.5
2122 Female, age 85, midline 601.9
2853 Male, age 76, midline 517.1
Posteroventral cochlear nucleus
nTPM: 602.0
2371 Male, age 61, both hemispheres 648.0
2341 Male, age 80, both hemispheres 630.8
2070 Male, age 76, both hemispheres 602.4
2752 Female, age 85, both hemispheres 596.5
2135 Female, age 91, both hemispheres 532.4
Prepositus hypoglossal nucleus
nTPM: 510.9
2855 Female, age 85, right hemisphere 511.0
2086 Male, age 80, both hemispheres 510.8
Principal sensory trigeminal nucleus
nTPM: 561.0
2367 Female, age 91, left hemisphere 628.4
2158 Male, age 61, both hemispheres 553.1
2008 Male, age 80, left hemisphere 552.1
2324 Male, age 76, both hemispheres 510.2
Reticular pontine nucleus, caudal
nTPM: 688.6
2457 Female, age 91, both hemispheres 854.4
2092 Male, age 76, both hemispheres 643.7
2332 Male, age 80, right hemisphere 628.3
2559 Male, age 74, both hemispheres 628.0
Reticular pontine nucleus, oral
nTPM: 632.3
2361 Male, age 74, both hemispheres 690.3
1939 Male, age 80, both hemispheres 646.3
2366 Female, age 91, both hemispheres 615.9
2012 Female, age 85, both hemispheres 614.9
2167 Male, age 76, both hemispheres 594.2
Reticulotegmental nucleus
nTPM: 664.4
2322 Female, age 91, both hemispheres 806.4
2452 Male, age 74, both hemispheres 702.9
2333 Male, age 80, both hemispheres 668.5
2325 Male, age 76, both hemispheres 479.8
Spinal trigeminal nucleus, caudal
nTPM: 582.8
2390 Female, age 91, both hemispheres 632.8
2447 Male, age 76, both hemispheres 614.3
2312 Male, age 61, both hemispheres 600.0
2308 Male, age 80, both hemispheres 551.1
2642 Male, age 74, both hemispheres 515.8
Spinal trigeminal nucleus, interpolar
nTPM: 585.1
2389 Female, age 91, both hemispheres 691.0
2386 Female, age 85, both hemispheres 593.7
2625 Male, age 61, both hemispheres 553.4
2033 Male, age 80, both hemispheres 551.9
2066 Male, age 76, right hemisphere 535.4
Spinal trigeminal nucleus, oral
nTPM: 581.1
2164 Male, age 80, both hemispheres 634.1
1978 Male, age 76, both hemispheres 571.6
2737 Female, age 85, both hemispheres 537.6
Spinal vestibular nucleus
nTPM: 657.5
2748 Male, age 76, both hemispheres 738.5
2384 Male, age 74, both hemispheres 687.4
2186 Female, age 91, both hemispheres 679.8
2806 Female, age 85, both hemispheres 634.2
2796 Male, age 61, both hemispheres 615.4
2780 Male, age 80, both hemispheres 589.5
Subcoeruleus area
nTPM: 570.7
2369 Female, age 85, left hemisphere 686.3
2451 Male, age 74, both hemispheres 568.3
2089 Male, age 76, left hemisphere 539.3
1958 Male, age 80, both hemispheres 535.5
2323 Female, age 91, left hemisphere 524.2
Superior olive
nTPM: 615.3
2561 Female, age 91, both hemispheres 658.4
2020 Male, age 76, both hemispheres 656.8
2329 Male, age 80, right hemisphere 623.3
1875 Female, age 85, both hemispheres 597.1
2364 Male, age 74, right hemisphere 540.7
Superior vestibular nucleus
nTPM: 496.5
2015 Male, age 80, both hemispheres 546.1
2061 Male, age 76, both hemispheres 480.9
2383 Male, age 74, both hemispheres 462.5
Ventral medullary reticular nucleus
nTPM: 652.2
2060 Male, age 76, both hemispheres 656.9
2372 Male, age 61, both hemispheres 647.5
Ventral periolivary nuclei
nTPM: 567.9
2023 Male, age 76, both hemispheres 631.0
2165 Male, age 80, both hemispheres 612.4
2794 Female, age 91, left hemisphere 545.7
2130 Female, age 85, both hemispheres 482.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 586.7
2118 Male, age 80, both hemispheres 621.9
2180 Male, age 61, both hemispheres 595.0
1986 Male, age 76, both hemispheres 585.9
2302 Female, age 91, both hemispheres 580.3
2741 Female, age 85, both hemispheres 550.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 643.5
2456 Female, age 91, both hemispheres 871.8
2449 Male, age 74, both hemispheres 629.0
2840 Female, age 85, both hemispheres 625.1
2161 Male, age 80, both hemispheres 618.3
1959 Male, age 76, both hemispheres 589.6
2359 Male, age 61, both hemispheres 526.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 774.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 774.1
FF:10165-103B3 76 years, female 851.3
FF:10182-103D2 60 years, female 696.8
Medulla oblongata
Scaled Tags Per Million: 436.5
FF:10038-101F2 18-64 years, mixed 536.7
FF:10155-103A2 76 years, female 492.2
FF:10174-103C3 60 years, female 280.6
Pons
Scaled Tags Per Million: 531.4
FF:10033-101E6 18-54 years, mixed 531.4

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 233.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 233.6
Samples: 4

Max nTPM: 287.4
Min nTPM: 171.9
Sample A Female 207.4
Sample B Female 171.9
Sample C Male 287.4
Sample D Male 267.7
Pons
nTPM: 225.8
Samples: 4

Max nTPM: 292.6
Min nTPM: 168.3
Sample A Female 180.8
Sample B Female 168.3
Sample C Male 292.6
Sample D Male 261.5

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 721.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 721.0
Samples: 4

Max nTPM: 768.6
Min nTPM: 699.0
Sample A Male 768.6
Sample B Male 715.2
Sample C Female 699.0
Sample D Female 701.1

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 14.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 14.2
75042261 Antisense, RP_060412_02_D03, Mouse strain C57BL/6J (56 days, male) 15.5
631703 Antisense, RP_040907_01_A03, Mouse strain C57BL/6J (56 days, male) 12.8
Pons
Expression energy: 14.3
75042261 Antisense, RP_060412_02_D03, Mouse strain C57BL/6J (56 days, male) 16.8
631703 Antisense, RP_040907_01_A03, Mouse strain C57BL/6J (56 days, male) 11.8

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