HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:147.8 nTPM
HPA:147.8 nTPM
GTEx:97.3 nTPM
FANTOM5:167.5 Scaled Tags Per Million
Pig:68.3 nTPM
Mouse:28.7 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015876
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 147.8
Sample id Sample description nTPM
Hippocampus
nTPM: 147.8
2148 Female, age 91, left hemisphere 165.5
2529 Female, age 94, left hemisphere 158.2
1898 Male, age 80, left hemisphere 151.6
1911 Female, age 85, right hemisphere 144.0
1855 Male, age 76, left hemisphere 141.1
2621 Female, age 67, right hemisphere 126.2
Dentate gyrus
nTPM: 141.3
2528 Male, age 74, both hemispheres 193.8
2530 Female, age 94, left hemisphere 138.5
2246 Female, age 85, both hemispheres 136.7
2010 Male, age 76, both hemispheres 136.5
1927 Female, age 91, both hemispheres 121.2
2531 Female, age 67, both hemispheres 121.0
Entorhinal gyrus
nTPM: 131.4
2117 Female, age 91, right hemisphere 182.7
1787 Male, age 76, left hemisphere 132.6
2686 Male, age 75, right hemisphere 123.9
2764 Male, age 80, right hemisphere 119.4
1938 Female, age 85, left hemisphere 118.6
2613 Female, age 94, left hemisphere 111.1
Hippocampus, CA1
nTPM: 134.5
2527 Male, age 74, both hemispheres 159.6
2082 Female, age 91, right hemisphere 150.8
1873 Female, age 85, both hemispheres 137.9
2045 Male, age 76, both hemispheres 121.4
2749 Male, age 80, left hemisphere 102.9
Hippocampus, CA2
nTPM: 143.5
2249 Male, age 74, both hemispheres 194.3
2113 Female, age 91, right hemisphere 154.8
1940 Female, age 85, left hemisphere 153.0
1963 Male, age 80, left hemisphere 128.8
2437 Female, age 94, left hemisphere 123.7
1892 Male, age 76, both hemispheres 106.7
Hippocampus, CA3
nTPM: 131.3
2436 Male, age 74, both hemispheres 159.9
1891 Female, age 85, both hemispheres 140.3
2620 Female, age 94, left hemisphere 140.3
2861 Female, age 67, both hemispheres 121.6
1867 Male, age 76, both hemispheres 115.3
2137 Male, age 80, left hemisphere 110.4
Parahippocampal cortex
nTPM: 124.7
2250 Female, age 67, right hemisphere 136.0
2692 Male, age 74, both hemispheres 134.1
1990 Female, age 91, right hemisphere 131.8
2018 Male, age 76, both hemispheres 131.4
2245 Female, age 91, both hemispheres 128.7
2622 Female, age 67, right hemisphere 123.1
1933 Female, age 85, both hemispheres 119.8
1850 Male, age 80, both hemispheres 117.9
2532 Female, age 72, left hemisphere 113.5
2693 Female, age 94, both hemispheres 110.7
Perirhinal gyrus
nTPM: 119.1
2848 Male, age 76, right hemisphere 124.0
1847 Female, age 91, left hemisphere 121.3
1841 Female, age 85, right hemisphere 117.0
1794 Male, age 80, right hemisphere 116.8
2521 Female, age 94, right hemisphere 116.3
Subiculum
nTPM: 140.9
2729 Female, age 91, right hemisphere 190.5
2619 Male, age 74, both hemispheres 149.6
2042 Male, age 76, both hemispheres 134.4
1901 Male, age 80, both hemispheres 128.0
1977 Female, age 85, both hemispheres 122.8
2438 Female, age 94, left hemisphere 120.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 97.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 97.3
Samples: 197

Max nTPM: 382.4
Min nTPM: 28.8
Std nTPM: 49.1
Median nTPM: 87.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 382.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 281.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 266.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 239.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 232.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 229.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 207.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 187.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 182.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 179.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 171.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 167.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 167.5
FF:10153-102I9 76 years, female 217.8
FF:10169-103B7 60 years, female 117.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.8
Samples: 4

Max nTPM: 69.6
Min nTPM: 45.2
Sample A Female 67.4
Sample B Female 52.8
Sample C Male 69.6
Sample D Male 45.2
Entorhinal cortex
nTPM: 68.3
Samples: 4

Max nTPM: 75.9
Min nTPM: 60.8
Sample A Female 75.9
Sample B Female 71.0
Sample C Male 65.4
Sample D Male 60.8
Subiculum
nTPM: 66.4
Samples: 4

Max nTPM: 73.6
Min nTPM: 55.0
Sample A Female 73.6
Sample B Female 55.0
Sample C Male 72.9
Sample D Male 64.0
Ventral hippocampus
nTPM: 66.2
Samples: 4

Max nTPM: 88.2
Min nTPM: 52.0
Sample A Female 62.7
Sample B Female 52.0
Sample C Male 88.2
Sample D Male 61.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.3
Samples: 4

Max nTPM: 29.6
Min nTPM: 20.9
Sample A Male 20.9
Sample B Male 21.4
Sample C Female 29.1
Sample D Female 29.6
Hippocampal formation
nTPM: 28.7
Samples: 4

Max nTPM: 38.2
Min nTPM: 21.5
Sample A Male 25.5
Sample B Male 21.5
Sample C Female 29.6
Sample D Female 38.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68302203 Antisense, RP_041130_02_D06, Mouse strain C57BL/6J (56 days, male) 1.5
77454961 Antisense, RP_070129_01_E04, Mouse strain C57BL/6J (56 days, male) 0.6
77866850 Antisense, RP_070129_01_E04, Mouse strain C57BL/6J (56 days, male) 0.2
1181 Antisense, RP_Baylor_103301, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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