HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:143.0 nTPM
HPA:143.0 nTPM
GTEx:180.4 nTPM
FANTOM5:128.9 Scaled Tags Per Million
Pig:13.7 nTPM
Mouse:739.9 nTPM
Allen mouse:13.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 143.0
Sample id Sample description nTPM
Hippocampus
nTPM: 135.4
1898 Male, age 80, left hemisphere 158.7
2621 Female, age 67, right hemisphere 134.1
1855 Male, age 76, left hemisphere 131.6
2148 Female, age 91, left hemisphere 130.2
1911 Female, age 85, right hemisphere 129.3
2529 Female, age 94, left hemisphere 128.4
Dentate gyrus
nTPM: 134.4
1927 Female, age 91, both hemispheres 149.2
2010 Male, age 76, both hemispheres 141.4
2528 Male, age 74, both hemispheres 136.0
2530 Female, age 94, left hemisphere 131.9
2246 Female, age 85, both hemispheres 126.4
2531 Female, age 67, both hemispheres 121.7
Entorhinal gyrus
nTPM: 131.9
2764 Male, age 80, right hemisphere 138.8
1938 Female, age 85, left hemisphere 137.7
1787 Male, age 76, left hemisphere 131.0
2613 Female, age 94, left hemisphere 129.4
2117 Female, age 91, right hemisphere 128.1
2686 Male, age 75, right hemisphere 126.1
Hippocampus, CA1
nTPM: 143.0
2749 Male, age 80, left hemisphere 170.6
1873 Female, age 85, both hemispheres 141.9
2527 Male, age 74, both hemispheres 135.4
2045 Male, age 76, both hemispheres 134.9
2082 Female, age 91, right hemisphere 132.2
Hippocampus, CA2
nTPM: 141.5
2249 Male, age 74, both hemispheres 157.1
1892 Male, age 76, both hemispheres 153.4
1963 Male, age 80, left hemisphere 150.3
2113 Female, age 91, right hemisphere 129.8
2437 Female, age 94, left hemisphere 129.6
1940 Female, age 85, left hemisphere 128.9
Hippocampus, CA3
nTPM: 139.0
2436 Male, age 74, both hemispheres 162.3
2137 Male, age 80, left hemisphere 145.0
1867 Male, age 76, both hemispheres 144.9
1891 Female, age 85, both hemispheres 134.1
2620 Female, age 94, left hemisphere 125.1
2861 Female, age 67, both hemispheres 122.8
Parahippocampal cortex
nTPM: 132.1
1850 Male, age 80, both hemispheres 144.3
1990 Female, age 91, right hemisphere 139.8
1933 Female, age 85, both hemispheres 138.6
2250 Female, age 67, right hemisphere 136.6
2018 Male, age 76, both hemispheres 134.4
2245 Female, age 91, both hemispheres 128.2
2693 Female, age 94, both hemispheres 127.8
2692 Male, age 74, both hemispheres 126.0
2532 Female, age 72, left hemisphere 123.9
2622 Female, age 67, right hemisphere 121.2
Perirhinal gyrus
nTPM: 139.2
1847 Female, age 91, left hemisphere 154.2
1794 Male, age 80, right hemisphere 141.6
1841 Female, age 85, right hemisphere 141.0
2521 Female, age 94, right hemisphere 131.3
2848 Male, age 76, right hemisphere 128.2
Subiculum
nTPM: 130.7
1901 Male, age 80, both hemispheres 140.6
1977 Female, age 85, both hemispheres 136.2
2042 Male, age 76, both hemispheres 131.1
2729 Female, age 91, right hemisphere 130.6
2619 Male, age 74, both hemispheres 127.4
2438 Female, age 94, left hemisphere 118.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 180.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 180.4
Samples: 197

Max nTPM: 458.7
Min nTPM: 71.4
Std nTPM: 67.5
Median nTPM: 165.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 458.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 390.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 340.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 328.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 324.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 323.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 320.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 304.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 301.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 299.5
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 299.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 128.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 128.9
FF:10169-103B7 60 years, female 146.4
FF:10153-102I9 76 years, female 111.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 17.0
Min nTPM: 11.3
Sample A Female 17.0
Sample B Female 12.7
Sample C Male 13.8
Sample D Male 11.3
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 13.6
Min nTPM: 11.3
Sample A Female 11.6
Sample B Female 13.6
Sample C Male 11.7
Sample D Male 11.3
Subiculum
nTPM: 11.4
Samples: 4

Max nTPM: 13.7
Min nTPM: 9.7
Sample A Female 13.7
Sample B Female 10.8
Sample C Male 11.5
Sample D Male 9.7
Ventral hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 14.3
Min nTPM: 10.9
Sample A Female 14.3
Sample B Female 10.9
Sample C Male 14.2
Sample D Male 13.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 739.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 690.2
Samples: 4

Max nTPM: 714.5
Min nTPM: 668.4
Sample A Male 676.4
Sample B Male 714.5
Sample C Female 701.6
Sample D Female 668.4
Hippocampal formation
nTPM: 739.9
Samples: 4

Max nTPM: 784.9
Min nTPM: 698.8
Sample A Male 784.9
Sample B Male 698.8
Sample C Female 718.7
Sample D Female 757.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.5
69526970 Antisense, RP_050421_02_A07, Mouse strain C57BL/6J (56 days, male) 13.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.