PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:2828.4 nTPM
HPA:2828.4 nTPM
FANTOM5:29.7 Scaled Tags Per Million
Pig:1842.8 nTPM
Mouse:2956.8 nTPM
Allen mouse:23.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 2828.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 2523.3
2090 Male, age 80, both hemispheres 2682.2
2301 Female, age 85, both hemispheres 2583.2
2188 Female, age 91, both hemispheres 2496.9
1984 Male, age 76, both hemispheres 2330.9
Area postrema
nTPM: 2700.4
2799 Male, age 61, both hemispheres 3027.5
2306 Male, age 80, both hemispheres 2753.9
2054 Male, age 76, both hemispheres 2319.9
Cuneate nuclei
nTPM: 2467.9
2376 Male, age 61, both hemispheres 2627.2
2381 Male, age 80, both hemispheres 2496.3
2131 Male, age 76, both hemispheres 2280.3
Dorsal cochlear nucleus
nTPM: 2636.0
2802 Male, age 74, right hemisphere 2911.9
2378 Male, age 80, both hemispheres 2713.9
2187 Female, age 91, both hemispheres 2571.5
2370 Male, age 61, both hemispheres 2529.0
2058 Male, age 76, both hemispheres 2453.9
Dorsal medullary reticular nucleus
nTPM: 2430.7
2373 Male, age 61, both hemispheres 2545.1
2040 Female, age 85, both hemispheres 2382.5
2088 Male, age 76, both hemispheres 2364.5
Dorsal motor vagal complex
nTPM: 2495.3
2797 Male, age 61, both hemispheres 2868.5
2643 Male, age 74, both hemispheres 2585.2
2807 Female, age 85, both hemispheres 2584.9
2844 Male, age 55, unknown 2434.1
2185 Male, age 76, both hemispheres 2419.9
2133 Female, age 91, both hemispheres 2414.4
2000 Male, age 74, unknown 2390.6
2813 Female, age 72, unknown 2265.0
Dorsal tegmental nucleus
nTPM: 2500.3
2326 Male, age 74, both hemispheres 2731.0
2083 Male, age 80, both hemispheres 2597.0
1936 Male, age 76, left hemisphere 2378.5
2358 Male, age 61, both hemispheres 2294.8
Dorsolateral tegmental area
nTPM: 2557.2
2337 Male, age 61, both hemispheres 2717.0
2654 Male, age 80, both hemispheres 2645.3
2360 Male, age 74, both hemispheres 2601.7
2751 Female, age 85, both hemispheres 2539.7
2141 Male, age 76, both hemispheres 2282.3
Gigantocellular reticular nuclei, medullary
nTPM: 2505.8
2314 Male, age 61, both hemispheres 2803.1
2387 Female, age 91, both hemispheres 2672.4
2462 Male, age 74, both hemispheres 2442.9
2310 Male, age 80, both hemispheres 2410.1
2022 Male, age 76, right hemisphere 2357.8
1876 Female, age 85, both hemispheres 2348.6
Gigantocellular reticular nuclei, pars
nTPM: 2332.8
2084 Female, age 85, both hemispheres 2408.8
2336 Male, age 61, both hemispheres 2366.6
2706 Male, age 80, both hemispheres 2337.7
2330 Male, age 80, both hemispheres 2310.1
2168 Male, age 76, both hemispheres 2240.7
Inferior olive
nTPM: 2688.9
2178 Male, age 61, both hemispheres 2791.6
2379 Male, age 80, both hemispheres 2783.6
2085 Female, age 85, both hemispheres 2732.8
2563 Male, age 74, both hemispheres 2662.0
2628 Female, age 91, both hemispheres 2474.3
Kolliker-Fuse nucleus
nTPM: 2466.1
2315 Male, age 76, right hemisphere 2774.3
2793 Female, age 91, left hemisphere 2330.2
2163 Male, age 80, both hemispheres 2293.9
Lateral lemniscal nuclei
nTPM: 2331.4
2746 Female, age 85, left hemisphere 2449.7
2036 Male, age 80, both hemispheres 2351.0
2320 Female, age 91, left hemisphere 2328.4
2453 Male, age 74, right hemisphere 2289.7
2169 Male, age 76, both hemispheres 2238.2
Lateral medullary reticular nucleus
nTPM: 2584.6
2190 Female, age 85, both hemispheres 2699.5
2305 Male, age 74, both hemispheres 2670.3
2852 Male, age 80, both hemispheres 2652.6
2804 Female, age 91, both hemispheres 2592.1
2374 Male, age 61, both hemispheres 2534.1
2044 Male, age 76, both hemispheres 2358.8
Lateral parabrachial nucleus
nTPM: 2543.3
2792 Male, age 76, both hemispheres 2703.8
2013 Male, age 80, both hemispheres 2649.1
2139 Female, age 85, right hemisphere 2490.8
2790 Male, age 61, both hemispheres 2329.3
Lateral vestibular nucleus
nTPM: 2438.1
2311 Male, age 80, both hemispheres 2621.2
2184 Male, age 76, both hemispheres 2255.0
Locus coeruleus
nTPM: 2343.9
2317 Female, age 72, unknown 2470.5
2162 Male, age 80, both hemispheres 2408.5
2123 Female, age 91, both hemispheres 2386.9
2720 Male, age 74, both hemispheres 2359.9
2014 Male, age 55, unknown 2315.0
1980 Male, age 76, both hemispheres 2251.9
2788 Male, age 74, unknown 2214.9
Medial olivary nucleus
nTPM: 2828.4
1943 Male, age 61, both hemispheres 2990.5
1962 Male, age 76, both hemispheres 2976.8
2138 Female, age 91, both hemispheres 2833.5
2851 Male, age 80, both hemispheres 2512.8
Medial parabrachial nucleus
nTPM: 2403.5
2170 Female, age 91, both hemispheres 2578.1
2463 Female, age 85, right hemisphere 2474.3
2854 Male, age 80, both hemispheres 2347.5
2786 Male, age 76, both hemispheres 2323.1
2156 Male, age 61, both hemispheres 2294.7
Medial periolivary nuclei
nTPM: 2393.0
2081 Male, age 80, both hemispheres 2489.2
2063 Male, age 76, both hemispheres 2481.8
2458 Female, age 91, both hemispheres 2397.0
2791 Male, age 74, right hemisphere 2395.5
2171 Female, age 85, both hemispheres 2201.3
Medial vestibular nucleus
nTPM: 2401.2
2801 Male, age 74, both hemispheres 2471.6
2093 Male, age 80, both hemispheres 2448.7
2743 Female, age 85, both hemispheres 2447.7
2803 Female, age 91, both hemispheres 2435.6
2624 Male, age 61, both hemispheres 2349.6
2134 Male, age 76, both hemispheres 2253.9
Motor facial nucleus
nTPM: 2402.5
2126 Male, age 61, both hemispheres 2616.3
2795 Female, age 91, both hemispheres 2527.2
2062 Male, age 76, both hemispheres 2407.3
2365 Male, age 74, right hemisphere 2405.9
2697 Female, age 85, both hemispheres 2270.0
2327 Male, age 80, both hemispheres 2188.4
Motor hypoglossal nucleus
nTPM: 2406.6
2132 Female, age 85, both hemispheres 2578.5
2125 Female, age 91, both hemispheres 2545.6
2182 Male, age 80, both hemispheres 2478.5
2277 Male, age 76, both hemispheres 2320.1
2461 Male, age 61, both hemispheres 2110.4
Motor trigeminal nucleus
nTPM: 2385.2
2560 Male, age 74, both hemispheres 2463.1
2321 Female, age 91, both hemispheres 2458.7
2335 Male, age 61, both hemispheres 2400.9
2309 Male, age 76, both hemispheres 2330.3
2079 Male, age 80, both hemispheres 2273.3
Nuclei of the trapezoid body
nTPM: 2385.4
1983 Male, age 76, both hemispheres 2520.9
2368 Female, age 91, both hemispheres 2463.6
2166 Male, age 80, both hemispheres 2363.1
2159 Male, age 61, both hemispheres 2338.6
2735 Female, age 85, both hemispheres 2240.7
Nucleus ambiguus
nTPM: 2621.4
2071 Male, age 76, both hemispheres 2859.3
2096 Female, age 85, both hemispheres 2383.4
Nucleus cuneatus
nTPM: 2581.3
2380 Male, age 80, both hemispheres 2783.7
2808 Female, age 85, both hemispheres 2728.5
2805 Female, age 91, both hemispheres 2568.0
2564 Male, age 74, both hemispheres 2555.2
2562 Male, age 61, both hemispheres 2494.9
2100 Male, age 76, both hemispheres 2357.2
Nucleus gracilis
nTPM: 2673.7
2299 Female, age 85, both hemispheres 2846.4
2382 Male, age 80, both hemispheres 2684.1
2627 Male, age 74, both hemispheres 2490.5
Nucleus raphe magnus
nTPM: 2330.8
2459 Female, age 91, both hemispheres 2462.6
2051 Male, age 76, both hemispheres 2445.8
2328 Male, age 80, both hemispheres 2322.0
2455 Male, age 74, both hemispheres 2298.8
2160 Male, age 61, both hemispheres 2266.6
2172 Female, age 85, both hemispheres 2188.9
Nucleus raphe obscurus
nTPM: 2750.0
2142 Male, age 76, midline 2953.2
2845 Female, age 85, midline 2670.7
2800 Male, age 61, midline 2626.2
Nucleus raphe pallidus
nTPM: 2792.2
1924 Male, age 61, midline 2996.5
2145 Male, age 76, midline 2910.4
2183 Male, age 80, midline 2469.6
Nucleus tractus solitarii
nTPM: 2398.7
2144 Female, age 91, right hemisphere 2499.5
2191 Female, age 85, both hemispheres 2492.1
2307 Male, age 80, both hemispheres 2316.6
2656 Male, age 76, both hemispheres 2286.5
Paramedian reticular nucleus
nTPM: 2415.1
2057 Male, age 80, both hemispheres 2518.3
2313 Male, age 61, both hemispheres 2470.9
2052 Male, age 76, both hemispheres 2399.6
2050 Female, age 85, both hemispheres 2271.7
Parvicellular reticular nuclei
nTPM: 2415.7
2119 Male, age 80, both hemispheres 2480.3
2095 Male, age 76, both hemispheres 2462.5
2558 Male, age 74, both hemispheres 2304.2
Parvicellular reticular nuclei, medullary
nTPM: 2396.7
2181 Male, age 80, left hemisphere 2401.9
2091 Female, age 85, both hemispheres 2400.1
2189 Female, age 91, both hemispheres 2388.1
Peritrigeminal nucleus
nTPM: 2638.3
2067 Female, age 85, both hemispheres 2790.0
2136 Male, age 76, both hemispheres 2623.7
2179 Male, age 61, both hemispheres 2501.0
Pontine nuclei
nTPM: 2434.7
2115 Male, age 80, left hemisphere 2534.8
2109 Female, age 72, unknown 2519.1
2319 Female, age 91, both hemispheres 2488.4
2454 Male, age 74, left hemisphere 2442.4
1968 Male, age 76, left hemisphere 2411.4
2727 Male, age 61, right hemisphere 2400.7
1863 Male, age 55, unknown 2350.4
2787 Female, age 85, both hemispheres 2330.9
Pontine raphe nucleus
nTPM: 2327.9
2122 Female, age 85, midline 2342.4
2853 Male, age 76, midline 2313.3
Posteroventral cochlear nucleus
nTPM: 2580.1
2341 Male, age 80, both hemispheres 2708.6
2371 Male, age 61, both hemispheres 2672.9
2135 Female, age 91, both hemispheres 2657.0
2752 Female, age 85, both hemispheres 2446.1
2070 Male, age 76, both hemispheres 2416.2
Prepositus hypoglossal nucleus
nTPM: 2564.0
2855 Female, age 85, right hemisphere 2576.8
2086 Male, age 80, both hemispheres 2551.1
Principal sensory trigeminal nucleus
nTPM: 2286.9
2158 Male, age 61, both hemispheres 2325.8
2367 Female, age 91, left hemisphere 2319.5
2324 Male, age 76, both hemispheres 2272.6
2008 Male, age 80, left hemisphere 2229.5
Reticular pontine nucleus, caudal
nTPM: 2372.8
2092 Male, age 76, both hemispheres 2491.1
2559 Male, age 74, both hemispheres 2466.6
2457 Female, age 91, both hemispheres 2342.2
2332 Male, age 80, right hemisphere 2191.3
Reticular pontine nucleus, oral
nTPM: 2383.9
2361 Male, age 74, both hemispheres 2474.0
1939 Male, age 80, both hemispheres 2427.8
2167 Male, age 76, both hemispheres 2384.9
2366 Female, age 91, both hemispheres 2335.9
2012 Female, age 85, both hemispheres 2297.1
Reticulotegmental nucleus
nTPM: 2427.1
2452 Male, age 74, both hemispheres 2560.5
2322 Female, age 91, both hemispheres 2477.1
2333 Male, age 80, both hemispheres 2392.3
2325 Male, age 76, both hemispheres 2278.5
Spinal trigeminal nucleus, caudal
nTPM: 2419.6
2312 Male, age 61, both hemispheres 2530.6
2308 Male, age 80, both hemispheres 2491.9
2642 Male, age 74, both hemispheres 2452.1
2447 Male, age 76, both hemispheres 2357.0
2390 Female, age 91, both hemispheres 2266.6
Spinal trigeminal nucleus, interpolar
nTPM: 2363.6
2033 Male, age 80, both hemispheres 2448.8
2386 Female, age 85, both hemispheres 2429.6
2389 Female, age 91, both hemispheres 2416.0
2066 Male, age 76, right hemisphere 2353.7
2625 Male, age 61, both hemispheres 2170.1
Spinal trigeminal nucleus, oral
nTPM: 2321.5
2164 Male, age 80, both hemispheres 2399.1
1978 Male, age 76, both hemispheres 2347.4
2737 Female, age 85, both hemispheres 2217.9
Spinal vestibular nucleus
nTPM: 2546.1
2384 Male, age 74, both hemispheres 2961.1
2780 Male, age 80, both hemispheres 2529.7
2806 Female, age 85, both hemispheres 2519.9
2748 Male, age 76, both hemispheres 2449.4
2186 Female, age 91, both hemispheres 2433.0
2796 Male, age 61, both hemispheres 2383.4
Subcoeruleus area
nTPM: 2418.8
2451 Male, age 74, both hemispheres 2743.2
2369 Female, age 85, left hemisphere 2495.6
1958 Male, age 80, both hemispheres 2329.3
2089 Male, age 76, left hemisphere 2268.0
2323 Female, age 91, left hemisphere 2257.7
Superior olive
nTPM: 2351.7
2020 Male, age 76, both hemispheres 2502.6
2364 Male, age 74, right hemisphere 2453.8
2561 Female, age 91, both hemispheres 2331.2
2329 Male, age 80, right hemisphere 2300.4
1875 Female, age 85, both hemispheres 2170.8
Superior vestibular nucleus
nTPM: 2573.8
2383 Male, age 74, both hemispheres 2621.6
2015 Male, age 80, both hemispheres 2605.2
2061 Male, age 76, both hemispheres 2494.5
Ventral medullary reticular nucleus
nTPM: 2564.6
2372 Male, age 61, both hemispheres 2727.3
2060 Male, age 76, both hemispheres 2401.8
Ventral periolivary nuclei
nTPM: 2315.9
2023 Male, age 76, both hemispheres 2544.2
2794 Female, age 91, left hemisphere 2311.5
2165 Male, age 80, both hemispheres 2278.3
2130 Female, age 85, both hemispheres 2129.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 2612.1
2118 Male, age 80, both hemispheres 2787.0
2302 Female, age 91, both hemispheres 2641.4
2180 Male, age 61, both hemispheres 2563.2
2741 Female, age 85, both hemispheres 2550.3
1986 Male, age 76, both hemispheres 2518.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 2408.3
2456 Female, age 91, both hemispheres 2549.4
2359 Male, age 61, both hemispheres 2508.4
2161 Male, age 80, both hemispheres 2458.2
1959 Male, age 76, both hemispheres 2343.5
2449 Male, age 74, both hemispheres 2302.5
2840 Female, age 85, both hemispheres 2287.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 26.2
FF:10182-103D2 60 years, female 28.4
FF:10165-103B3 76 years, female 24.0
Medulla oblongata
Scaled Tags Per Million: 29.7
FF:10174-103C3 60 years, female 35.4
FF:10155-103A2 76 years, female 28.7
FF:10038-101F2 18-64 years, mixed 25.0
Pons
Scaled Tags Per Million: 21.0
FF:10033-101E6 18-54 years, mixed 21.0

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 1842.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1842.8
Samples: 4

Max nTPM: 2285.0
Min nTPM: 1540.3
Sample A Female 1555.5
Sample B Female 1540.3
Sample C Male 1990.4
Sample D Male 2285.0
Pons
nTPM: 1685.3
Samples: 4

Max nTPM: 2042.1
Min nTPM: 1373.5
Sample A Female 1586.5
Sample B Female 1373.5
Sample C Male 2042.1
Sample D Male 1739.1

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 2956.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 2956.8
Samples: 4

Max nTPM: 3037.8
Min nTPM: 2844.7
Sample A Male 2907.2
Sample B Male 2844.7
Sample C Female 3037.3
Sample D Female 3037.8

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 23.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 23.3
73817934 Antisense, RP_051214_01_A05, Mouse strain C57BL/6J (56 days, male) 24.8
632492 Antisense, RP_040907_01_D12, Mouse strain C57BL/6J (56 days, male) 21.8
Pons
Expression energy: 23.8
73817934 Antisense, RP_051214_01_A05, Mouse strain C57BL/6J (56 days, male) 24.2
632492 Antisense, RP_040907_01_D12, Mouse strain C57BL/6J (56 days, male) 23.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.