HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:106.6 nTPM
HPA:106.6 nTPM
GTEx:138.8 nTPM
FANTOM5:125.2 Scaled Tags Per Million
Pig:87.9 nTPM
Mouse:264.2 nTPM
Allen mouse:10.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001931Antibody CAB026191
Glial cells Not detectedNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 106.6
Sample id Sample description nTPM
Hippocampus
nTPM: 91.7
1898 Male, age 80, left hemisphere 111.9
2529 Female, age 94, left hemisphere 98.4
2148 Female, age 91, left hemisphere 97.1
1855 Male, age 76, left hemisphere 84.5
2621 Female, age 67, right hemisphere 82.6
1911 Female, age 85, right hemisphere 75.7
Dentate gyrus
nTPM: 88.5
2530 Female, age 94, left hemisphere 113.8
1927 Female, age 91, both hemispheres 97.8
2010 Male, age 76, both hemispheres 86.4
2528 Male, age 74, both hemispheres 79.6
2246 Female, age 85, both hemispheres 78.0
2531 Female, age 67, both hemispheres 75.6
Entorhinal gyrus
nTPM: 106.1
2764 Male, age 80, right hemisphere 121.8
2613 Female, age 94, left hemisphere 117.3
1938 Female, age 85, left hemisphere 101.5
2117 Female, age 91, right hemisphere 100.6
1787 Male, age 76, left hemisphere 98.1
2686 Male, age 75, right hemisphere 97.4
Hippocampus, CA1
nTPM: 93.8
2749 Male, age 80, left hemisphere 134.0
1873 Female, age 85, both hemispheres 90.2
2527 Male, age 74, both hemispheres 86.2
2045 Male, age 76, both hemispheres 79.6
2082 Female, age 91, right hemisphere 78.7
Hippocampus, CA2
nTPM: 97.2
1963 Male, age 80, left hemisphere 121.4
1892 Male, age 76, both hemispheres 114.1
2437 Female, age 94, left hemisphere 99.2
2113 Female, age 91, right hemisphere 83.5
1940 Female, age 85, left hemisphere 83.4
2249 Male, age 74, both hemispheres 81.5
Hippocampus, CA3
nTPM: 89.1
2137 Male, age 80, left hemisphere 109.6
1867 Male, age 76, both hemispheres 98.7
2861 Female, age 67, both hemispheres 87.7
2620 Female, age 94, left hemisphere 84.6
1891 Female, age 85, both hemispheres 79.2
2436 Male, age 74, both hemispheres 75.1
Parahippocampal cortex
nTPM: 95.2
1850 Male, age 80, both hemispheres 114.6
1990 Female, age 91, right hemisphere 104.3
2245 Female, age 91, both hemispheres 102.3
2622 Female, age 67, right hemisphere 102.2
1933 Female, age 85, both hemispheres 97.7
2532 Female, age 72, left hemisphere 93.2
2692 Male, age 74, both hemispheres 89.0
2250 Female, age 67, right hemisphere 86.6
2018 Male, age 76, both hemispheres 81.5
2693 Female, age 94, both hemispheres 81.0
Perirhinal gyrus
nTPM: 106.6
1847 Female, age 91, left hemisphere 129.0
1794 Male, age 80, right hemisphere 124.9
1841 Female, age 85, right hemisphere 100.1
2521 Female, age 94, right hemisphere 95.6
2848 Male, age 76, right hemisphere 83.4
Subiculum
nTPM: 87.4
1901 Male, age 80, both hemispheres 96.7
1977 Female, age 85, both hemispheres 96.3
2438 Female, age 94, left hemisphere 90.3
2619 Male, age 74, both hemispheres 89.2
2729 Female, age 91, right hemisphere 83.3
2042 Male, age 76, both hemispheres 68.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 138.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 138.8
Samples: 197

Max nTPM: 321.7
Min nTPM: 38.8
Std nTPM: 43.1
Median nTPM: 133.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 321.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 282.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 254.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 244.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 242.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 240.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 236.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 228.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 226.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 219.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 216.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 125.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 125.2
FF:10153-102I9 76 years, female 135.4
FF:10169-103B7 60 years, female 115.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 87.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 87.9
Samples: 4

Max nTPM: 114.1
Min nTPM: 62.6
Sample A Female 114.1
Sample B Female 84.9
Sample C Male 90.0
Sample D Male 62.6
Entorhinal cortex
nTPM: 76.9
Samples: 4

Max nTPM: 92.1
Min nTPM: 59.5
Sample A Female 71.2
Sample B Female 92.1
Sample C Male 84.7
Sample D Male 59.5
Subiculum
nTPM: 78.0
Samples: 4

Max nTPM: 98.8
Min nTPM: 66.6
Sample A Female 98.8
Sample B Female 78.1
Sample C Male 68.6
Sample D Male 66.6
Ventral hippocampus
nTPM: 80.0
Samples: 4

Max nTPM: 93.3
Min nTPM: 70.0
Sample A Female 79.7
Sample B Female 70.0
Sample C Male 93.3
Sample D Male 77.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 264.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 264.2
Samples: 4

Max nTPM: 290.6
Min nTPM: 224.3
Sample A Male 290.6
Sample B Male 278.9
Sample C Female 262.8
Sample D Female 224.3
Hippocampal formation
nTPM: 233.8
Samples: 4

Max nTPM: 246.8
Min nTPM: 222.0
Sample A Male 246.8
Sample B Male 222.0
Sample C Female 241.9
Sample D Female 224.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
69783208 Antisense, RP_050505_04_E11, Mouse strain C57BL/6J (56 days, male) 10.8

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