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CSRP1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:552.3 nTPM
FANTOM5:621.5 Scaled Tags Per Million
Pig:110.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA045617
Glial cells Low
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 552.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 552.3
Samples: 246

Max nTPM: 1276.7
Min nTPM: 121.9
Std nTPM: 201.3
Median nTPM: 525.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1276.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1231.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1219.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1134.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1115.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1052.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1050.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1034.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 981.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 968.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 960.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 959.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 957.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 940.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 936.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 878.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 876.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 874.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 863.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 848.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 844.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 822.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 817.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 816.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 807.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 807.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 800.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 799.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 787.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 783.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 765.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 763.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 763.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 762.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 759.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 755.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 755.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 744.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 741.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 733.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 729.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 729.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 727.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 715.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 711.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 702.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 692.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 690.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 687.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 684.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 683.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 680.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 675.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 672.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 672.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 667.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 664.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 663.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 663.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 663.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 661.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 657.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 656.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 655.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 650.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 650.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 649.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 647.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 643.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 642.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 641.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 640.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 638.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 638.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 636.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 634.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 628.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 628.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 627.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 625.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 622.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 621.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 620.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 615.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 610.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 609.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 608.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 603.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 598.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 594.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 593.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 590.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 585.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 585.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 584.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 575.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 575.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 574.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 573.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 572.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 569.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 568.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 567.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 565.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 563.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 558.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 551.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 548.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 543.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 539.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 538.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 534.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 532.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 532.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 531.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 531.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 528.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 528.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 527.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 527.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 527.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 526.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 526.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 525.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 523.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 522.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 521.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 518.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 516.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 516.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 514.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 513.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 509.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 504.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 502.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 500.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 500.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 500.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 499.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 498.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 496.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 496.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 495.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 493.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 492.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 489.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 488.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 487.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 487.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 487.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 478.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 478.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 476.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 476.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 467.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 467.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 467.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 460.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 460.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 454.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 453.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 452.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 452.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 450.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 448.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 448.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 446.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 446.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 445.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 443.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 441.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 441.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 439.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 439.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 438.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 436.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 433.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 428.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 428.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 418.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 415.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 415.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 413.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 410.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 407.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 405.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 404.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 403.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 403.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 401.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 399.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 397.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 394.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 394.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 390.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 389.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 384.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 379.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 379.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 366.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 364.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 361.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 358.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 357.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 356.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 355.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 354.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 353.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 351.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 349.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 347.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 347.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 344.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 343.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 339.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 333.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 331.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 327.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 316.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 312.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 309.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 308.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 308.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 307.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 306.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 306.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 304.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 302.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 300.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 299.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 295.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 294.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 290.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 290.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 286.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 283.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 277.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 277.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 277.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 260.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 253.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 245.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 238.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 185.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 141.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 121.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 621.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 621.5
FF:10164-103B2 76 years, female 621.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 110.0
Pig sample Sample description nTPM
Caudate
nTPM: 110.0
Samples: 4

Max nTPM: 131.5
Min nTPM: 96.6
Sample A Female 98.9
Sample B Female 113.1
Sample C Male 131.5
Sample D Male 96.6

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