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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:783.8 nTPM
FANTOM5:1297.8 Scaled Tags Per Million
Pig:1108.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA044999
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 783.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 783.8
Samples: 246

Max nTPM: 2536.5
Min nTPM: 189.0
Std nTPM: 472.8
Median nTPM: 689.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2536.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1860.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1851.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1830.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 1798.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1786.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1783.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1746.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1715.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1712.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1706.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1697.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1647.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1644.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1635.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1633.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1627.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1599.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1595.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1579.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1569.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1562.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1562.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1553.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1547.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1539.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1514.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1463.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1451.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1450.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1439.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1437.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1434.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1429.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1394.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1358.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1345.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1340.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1338.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1318.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1316.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1312.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1283.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1281.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1280.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1274.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1265.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1247.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1246.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1234.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1228.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1213.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1199.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1188.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1146.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1135.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1134.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1116.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1110.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1100.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1096.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1067.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1064.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1039.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1038.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1037.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1035.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1031.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1030.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1020.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1017.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 991.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 989.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 983.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 976.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 973.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 972.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 971.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 968.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 965.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 965.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 963.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 960.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 959.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 938.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 937.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 930.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 928.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 926.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 922.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 917.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 910.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 896.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 894.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 871.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 866.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 856.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 852.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 851.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 844.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 841.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 838.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 834.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 820.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 818.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 809.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 808.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 801.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 801.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 791.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 785.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 766.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 763.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 755.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 741.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 741.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 715.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 712.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 707.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 707.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 706.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 704.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 702.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 676.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 673.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 669.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 650.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 648.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 642.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 634.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 625.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 621.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 619.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 602.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 598.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 590.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 588.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 582.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 577.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 572.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 570.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 553.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 550.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 547.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 546.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 544.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 541.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 539.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 536.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 532.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 529.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 528.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 527.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 526.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 520.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 516.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 512.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 488.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 485.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 483.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 478.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 476.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 476.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 473.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 465.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 462.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 452.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 451.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 446.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 435.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 430.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 424.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 420.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 411.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 407.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 405.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 402.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 400.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 386.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 386.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 383.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 382.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 378.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 376.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 372.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 367.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 366.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 354.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 353.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 351.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 334.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 325.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 320.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 317.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 316.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 314.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 311.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 305.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 302.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 300.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 295.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 293.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 288.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 288.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 287.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 286.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 282.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 279.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 274.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 274.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 273.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 272.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 272.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 271.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 270.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 269.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 269.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 268.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 268.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 266.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 265.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 263.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 261.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 257.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 257.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 257.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 255.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 255.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 252.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 249.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 247.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 246.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 241.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 235.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 234.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 227.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 219.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 218.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 217.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 216.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 210.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 203.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 200.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 197.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 196.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 189.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1297.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1297.8
FF:10164-103B2 76 years, female 1297.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1108.6
Pig sample Sample description nTPM
Caudate
nTPM: 1108.6
Samples: 4

Max nTPM: 1389.5
Min nTPM: 848.9
Sample A Female 848.9
Sample B Female 1233.6
Sample C Male 1389.5
Sample D Male 962.4

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