PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:248.9 nTPM
HPA:248.9 nTPM
FANTOM5:372.8 Scaled Tags Per Million
Pig:284.6 nTPM
Mouse:624.8 nTPM
Allen mouse:7.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 248.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 185.0
2188 Female, age 91, both hemispheres 197.2
2090 Male, age 80, both hemispheres 185.3
1984 Male, age 76, both hemispheres 184.7
2301 Female, age 85, both hemispheres 172.7
Area postrema
nTPM: 172.1
2799 Male, age 61, both hemispheres 179.1
2054 Male, age 76, both hemispheres 168.9
2306 Male, age 80, both hemispheres 168.3
Cuneate nuclei
nTPM: 181.7
2131 Male, age 76, both hemispheres 194.1
2376 Male, age 61, both hemispheres 183.7
2381 Male, age 80, both hemispheres 167.4
Dorsal cochlear nucleus
nTPM: 185.6
2802 Male, age 74, right hemisphere 196.6
2187 Female, age 91, both hemispheres 191.7
2058 Male, age 76, both hemispheres 181.8
2370 Male, age 61, both hemispheres 181.6
2378 Male, age 80, both hemispheres 176.3
Dorsal medullary reticular nucleus
nTPM: 196.7
2040 Female, age 85, both hemispheres 238.7
2373 Male, age 61, both hemispheres 179.8
2088 Male, age 76, both hemispheres 171.7
Dorsal motor vagal complex
nTPM: 184.1
2133 Female, age 91, both hemispheres 211.4
2844 Male, age 55, unknown 209.5
2000 Male, age 74, unknown 199.3
2813 Female, age 72, unknown 195.9
2643 Male, age 74, both hemispheres 178.5
2185 Male, age 76, both hemispheres 161.4
2797 Male, age 61, both hemispheres 160.6
2807 Female, age 85, both hemispheres 156.2
Dorsal tegmental nucleus
nTPM: 194.9
2083 Male, age 80, both hemispheres 208.9
2326 Male, age 74, both hemispheres 202.3
2358 Male, age 61, both hemispheres 190.0
1936 Male, age 76, left hemisphere 178.4
Dorsolateral tegmental area
nTPM: 197.2
2751 Female, age 85, both hemispheres 209.4
2654 Male, age 80, both hemispheres 201.9
2141 Male, age 76, both hemispheres 195.8
2360 Male, age 74, both hemispheres 195.0
2337 Male, age 61, both hemispheres 183.9
Gigantocellular reticular nuclei, medullary
nTPM: 197.5
2462 Male, age 74, both hemispheres 225.6
1876 Female, age 85, both hemispheres 213.3
2387 Female, age 91, both hemispheres 191.2
2310 Male, age 80, both hemispheres 188.9
2022 Male, age 76, right hemisphere 188.7
2314 Male, age 61, both hemispheres 177.6
Gigantocellular reticular nuclei, pars
nTPM: 204.8
2168 Male, age 76, both hemispheres 243.0
2084 Female, age 85, both hemispheres 218.3
2336 Male, age 61, both hemispheres 195.8
2706 Male, age 80, both hemispheres 187.2
2330 Male, age 80, both hemispheres 179.7
Inferior olive
nTPM: 183.9
2563 Male, age 74, both hemispheres 205.3
2628 Female, age 91, both hemispheres 187.1
2085 Female, age 85, both hemispheres 183.5
2178 Male, age 61, both hemispheres 174.9
2379 Male, age 80, both hemispheres 168.7
Kolliker-Fuse nucleus
nTPM: 198.8
2793 Female, age 91, left hemisphere 209.0
2163 Male, age 80, both hemispheres 207.6
2315 Male, age 76, right hemisphere 179.8
Lateral lemniscal nuclei
nTPM: 223.8
2169 Male, age 76, both hemispheres 245.6
2746 Female, age 85, left hemisphere 235.5
2036 Male, age 80, both hemispheres 229.7
2453 Male, age 74, right hemisphere 216.5
2320 Female, age 91, left hemisphere 191.5
Lateral medullary reticular nucleus
nTPM: 196.2
2044 Male, age 76, both hemispheres 224.5
2305 Male, age 74, both hemispheres 213.1
2804 Female, age 91, both hemispheres 186.8
2374 Male, age 61, both hemispheres 186.2
2190 Female, age 85, both hemispheres 185.9
2852 Male, age 80, both hemispheres 180.9
Lateral parabrachial nucleus
nTPM: 201.3
2139 Female, age 85, right hemisphere 243.0
2013 Male, age 80, both hemispheres 205.8
2790 Male, age 61, both hemispheres 185.9
2792 Male, age 76, both hemispheres 170.3
Lateral vestibular nucleus
nTPM: 188.0
2184 Male, age 76, both hemispheres 192.7
2311 Male, age 80, both hemispheres 183.3
Locus coeruleus
nTPM: 223.3
2123 Female, age 91, both hemispheres 249.7
2014 Male, age 55, unknown 239.9
2720 Male, age 74, both hemispheres 225.5
1980 Male, age 76, both hemispheres 216.6
2317 Female, age 72, unknown 215.8
2788 Male, age 74, unknown 214.9
2162 Male, age 80, both hemispheres 200.6
Medial olivary nucleus
nTPM: 181.6
2138 Female, age 91, both hemispheres 185.9
2851 Male, age 80, both hemispheres 184.2
1943 Male, age 61, both hemispheres 181.0
1962 Male, age 76, both hemispheres 175.4
Medial parabrachial nucleus
nTPM: 200.1
2170 Female, age 91, both hemispheres 217.3
2854 Male, age 80, both hemispheres 214.4
2156 Male, age 61, both hemispheres 191.1
2463 Female, age 85, right hemisphere 190.3
2786 Male, age 76, both hemispheres 187.4
Medial periolivary nuclei
nTPM: 220.9
2171 Female, age 85, both hemispheres 252.3
2063 Male, age 76, both hemispheres 244.1
2791 Male, age 74, right hemisphere 219.9
2458 Female, age 91, both hemispheres 196.4
2081 Male, age 80, both hemispheres 191.8
Medial vestibular nucleus
nTPM: 206.7
2743 Female, age 85, both hemispheres 212.9
2801 Male, age 74, both hemispheres 211.9
2134 Male, age 76, both hemispheres 207.2
2093 Male, age 80, both hemispheres 207.1
2803 Female, age 91, both hemispheres 203.3
2624 Male, age 61, both hemispheres 197.6
Motor facial nucleus
nTPM: 213.3
2062 Male, age 76, both hemispheres 248.5
2365 Male, age 74, right hemisphere 233.8
2697 Female, age 85, both hemispheres 212.7
2795 Female, age 91, both hemispheres 201.5
2126 Male, age 61, both hemispheres 195.1
2327 Male, age 80, both hemispheres 188.0
Motor hypoglossal nucleus
nTPM: 194.9
2125 Female, age 91, both hemispheres 212.3
2132 Female, age 85, both hemispheres 206.1
2461 Male, age 61, both hemispheres 202.1
2182 Male, age 80, both hemispheres 181.5
2277 Male, age 76, both hemispheres 172.4
Motor trigeminal nucleus
nTPM: 198.4
2560 Male, age 74, both hemispheres 215.1
2079 Male, age 80, both hemispheres 214.8
2335 Male, age 61, both hemispheres 189.6
2309 Male, age 76, both hemispheres 188.5
2321 Female, age 91, both hemispheres 183.8
Nuclei of the trapezoid body
nTPM: 227.6
2159 Male, age 61, both hemispheres 262.1
1983 Male, age 76, both hemispheres 244.4
2735 Female, age 85, both hemispheres 243.7
2166 Male, age 80, both hemispheres 204.2
2368 Female, age 91, both hemispheres 183.4
Nucleus ambiguus
nTPM: 178.3
2096 Female, age 85, both hemispheres 188.1
2071 Male, age 76, both hemispheres 168.4
Nucleus cuneatus
nTPM: 176.7
2564 Male, age 74, both hemispheres 206.5
2562 Male, age 61, both hemispheres 180.8
2805 Female, age 91, both hemispheres 173.7
2100 Male, age 76, both hemispheres 171.8
2808 Female, age 85, both hemispheres 165.3
2380 Male, age 80, both hemispheres 162.3
Nucleus gracilis
nTPM: 174.7
2627 Male, age 74, both hemispheres 203.8
2382 Male, age 80, both hemispheres 169.2
2299 Female, age 85, both hemispheres 151.2
Nucleus raphe magnus
nTPM: 234.8
2160 Male, age 61, both hemispheres 296.0
2172 Female, age 85, both hemispheres 262.0
2455 Male, age 74, both hemispheres 242.3
2051 Male, age 76, both hemispheres 211.6
2328 Male, age 80, both hemispheres 204.9
2459 Female, age 91, both hemispheres 192.3
Nucleus raphe obscurus
nTPM: 184.4
2800 Male, age 61, midline 195.9
2845 Female, age 85, midline 195.6
2142 Male, age 76, midline 161.7
Nucleus raphe pallidus
nTPM: 197.9
1924 Male, age 61, midline 220.8
2183 Male, age 80, midline 212.5
2145 Male, age 76, midline 160.5
Nucleus tractus solitarii
nTPM: 172.8
2656 Male, age 76, both hemispheres 193.2
2144 Female, age 91, right hemisphere 177.6
2307 Male, age 80, both hemispheres 160.5
2191 Female, age 85, both hemispheres 159.8
Paramedian reticular nucleus
nTPM: 213.2
2050 Female, age 85, both hemispheres 252.1
2057 Male, age 80, both hemispheres 217.9
2313 Male, age 61, both hemispheres 206.8
2052 Male, age 76, both hemispheres 175.8
Parvicellular reticular nuclei
nTPM: 207.1
2119 Male, age 80, both hemispheres 212.3
2558 Male, age 74, both hemispheres 211.5
2095 Male, age 76, both hemispheres 197.7
Parvicellular reticular nuclei, medullary
nTPM: 207.8
2189 Female, age 91, both hemispheres 220.4
2091 Female, age 85, both hemispheres 205.2
2181 Male, age 80, left hemisphere 197.7
Peritrigeminal nucleus
nTPM: 208.3
2179 Male, age 61, both hemispheres 211.6
2136 Male, age 76, both hemispheres 208.1
2067 Female, age 85, both hemispheres 205.1
Pontine nuclei
nTPM: 248.9
2787 Female, age 85, both hemispheres 307.4
1863 Male, age 55, unknown 287.9
2727 Male, age 61, right hemisphere 273.8
2109 Female, age 72, unknown 261.5
1968 Male, age 76, left hemisphere 236.8
2454 Male, age 74, left hemisphere 231.8
2319 Female, age 91, both hemispheres 197.7
2115 Male, age 80, left hemisphere 194.7
Pontine raphe nucleus
nTPM: 223.6
2122 Female, age 85, midline 246.5
2853 Male, age 76, midline 200.7
Posteroventral cochlear nucleus
nTPM: 190.2
2752 Female, age 85, both hemispheres 211.1
2070 Male, age 76, both hemispheres 195.0
2135 Female, age 91, both hemispheres 190.5
2341 Male, age 80, both hemispheres 183.4
2371 Male, age 61, both hemispheres 170.8
Prepositus hypoglossal nucleus
nTPM: 196.8
2855 Female, age 85, right hemisphere 204.4
2086 Male, age 80, both hemispheres 189.3
Principal sensory trigeminal nucleus
nTPM: 217.0
2158 Male, age 61, both hemispheres 263.5
2008 Male, age 80, left hemisphere 225.8
2367 Female, age 91, left hemisphere 196.8
2324 Male, age 76, both hemispheres 181.9
Reticular pontine nucleus, caudal
nTPM: 204.9
2092 Male, age 76, both hemispheres 224.7
2332 Male, age 80, right hemisphere 206.4
2559 Male, age 74, both hemispheres 203.9
2457 Female, age 91, both hemispheres 184.7
Reticular pontine nucleus, oral
nTPM: 214.6
2012 Female, age 85, both hemispheres 238.0
2361 Male, age 74, both hemispheres 231.2
1939 Male, age 80, both hemispheres 215.3
2366 Female, age 91, both hemispheres 196.8
2167 Male, age 76, both hemispheres 191.9
Reticulotegmental nucleus
nTPM: 199.0
2325 Male, age 76, both hemispheres 209.9
2452 Male, age 74, both hemispheres 200.9
2333 Male, age 80, both hemispheres 193.4
2322 Female, age 91, both hemispheres 191.8
Spinal trigeminal nucleus, caudal
nTPM: 190.4
2390 Female, age 91, both hemispheres 214.7
2447 Male, age 76, both hemispheres 190.9
2642 Male, age 74, both hemispheres 190.8
2312 Male, age 61, both hemispheres 178.0
2308 Male, age 80, both hemispheres 177.4
Spinal trigeminal nucleus, interpolar
nTPM: 214.7
2066 Male, age 76, right hemisphere 249.0
2625 Male, age 61, both hemispheres 221.4
2033 Male, age 80, both hemispheres 205.5
2389 Female, age 91, both hemispheres 200.7
2386 Female, age 85, both hemispheres 197.0
Spinal trigeminal nucleus, oral
nTPM: 198.5
2737 Female, age 85, both hemispheres 205.0
2164 Male, age 80, both hemispheres 203.1
1978 Male, age 76, both hemispheres 187.4
Spinal vestibular nucleus
nTPM: 197.3
2186 Female, age 91, both hemispheres 210.5
2780 Male, age 80, both hemispheres 209.5
2806 Female, age 85, both hemispheres 199.1
2748 Male, age 76, both hemispheres 192.6
2796 Male, age 61, both hemispheres 189.3
2384 Male, age 74, both hemispheres 183.0
Subcoeruleus area
nTPM: 207.5
1958 Male, age 80, both hemispheres 222.4
2323 Female, age 91, left hemisphere 217.8
2089 Male, age 76, left hemisphere 207.1
2369 Female, age 85, left hemisphere 196.4
2451 Male, age 74, both hemispheres 193.6
Superior olive
nTPM: 220.4
1875 Female, age 85, both hemispheres 265.2
2364 Male, age 74, right hemisphere 228.8
2020 Male, age 76, both hemispheres 216.8
2329 Male, age 80, right hemisphere 197.3
2561 Female, age 91, both hemispheres 194.2
Superior vestibular nucleus
nTPM: 194.9
2383 Male, age 74, both hemispheres 207.2
2015 Male, age 80, both hemispheres 195.2
2061 Male, age 76, both hemispheres 182.4
Ventral medullary reticular nucleus
nTPM: 186.1
2060 Male, age 76, both hemispheres 192.2
2372 Male, age 61, both hemispheres 180.0
Ventral periolivary nuclei
nTPM: 218.5
2130 Female, age 85, both hemispheres 238.2
2165 Male, age 80, both hemispheres 229.1
2023 Male, age 76, both hemispheres 214.1
2794 Female, age 91, left hemisphere 192.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 198.4
1986 Male, age 76, both hemispheres 216.8
2741 Female, age 85, both hemispheres 214.1
2180 Male, age 61, both hemispheres 198.1
2302 Female, age 91, both hemispheres 182.8
2118 Male, age 80, both hemispheres 180.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 209.5
2449 Male, age 74, both hemispheres 227.0
1959 Male, age 76, both hemispheres 224.9
2840 Female, age 85, both hemispheres 224.8
2161 Male, age 80, both hemispheres 200.6
2456 Female, age 91, both hemispheres 191.1
2359 Male, age 61, both hemispheres 188.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 372.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 227.3
FF:10165-103B3 76 years, female 242.6
FF:10182-103D2 60 years, female 212.1
Medulla oblongata
Scaled Tags Per Million: 197.6
FF:10038-101F2 18-64 years, mixed 212.1
FF:10174-103C3 60 years, female 196.0
FF:10155-103A2 76 years, female 184.7
Pons
Scaled Tags Per Million: 372.8
FF:10033-101E6 18-54 years, mixed 372.8

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 284.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 221.1
Samples: 4

Max nTPM: 245.0
Min nTPM: 201.4
Sample A Female 220.5
Sample B Female 217.5
Sample C Male 245.0
Sample D Male 201.4
Pons
nTPM: 284.6
Samples: 4

Max nTPM: 372.3
Min nTPM: 217.2
Sample A Female 372.3
Sample B Female 217.2
Sample C Male 257.5
Sample D Male 291.5

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 624.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 624.8
Samples: 4

Max nTPM: 628.6
Min nTPM: 618.0
Sample A Male 625.0
Sample B Male 618.0
Sample C Female 628.6
Sample D Female 627.7

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 7.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.1
101 Antisense, RP_Baylor_102629, Mouse strain C57BL/6J (56 days, male) 7.1
Pons
Expression energy: 7.0
101 Antisense, RP_Baylor_102629, Mouse strain C57BL/6J (56 days, male) 7.0

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