HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:77.9 nTPM
HPA:77.9 nTPM
GTEx:59.6 nTPM
FANTOM5:27.9 Scaled Tags Per Million
Pig:47.8 nTPM
Mouse:84.3 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 77.9
Sample id Sample description nTPM
Hippocampus
nTPM: 74.5
1898 Male, age 80, left hemisphere 79.7
2621 Female, age 67, right hemisphere 74.7
2529 Female, age 94, left hemisphere 74.4
2148 Female, age 91, left hemisphere 74.0
1855 Male, age 76, left hemisphere 73.4
1911 Female, age 85, right hemisphere 71.1
Dentate gyrus
nTPM: 75.7
2530 Female, age 94, left hemisphere 78.6
2010 Male, age 76, both hemispheres 76.2
1927 Female, age 91, both hemispheres 75.8
2531 Female, age 67, both hemispheres 75.3
2528 Male, age 74, both hemispheres 75.2
2246 Female, age 85, both hemispheres 73.4
Entorhinal gyrus
nTPM: 75.7
2764 Male, age 80, right hemisphere 79.3
1938 Female, age 85, left hemisphere 77.0
2613 Female, age 94, left hemisphere 76.3
1787 Male, age 76, left hemisphere 76.0
2117 Female, age 91, right hemisphere 74.5
2686 Male, age 75, right hemisphere 71.2
Hippocampus, CA1
nTPM: 76.1
2749 Male, age 80, left hemisphere 86.2
1873 Female, age 85, both hemispheres 75.2
2527 Male, age 74, both hemispheres 74.0
2045 Male, age 76, both hemispheres 73.3
2082 Female, age 91, right hemisphere 71.8
Hippocampus, CA2
nTPM: 76.0
1963 Male, age 80, left hemisphere 79.5
1892 Male, age 76, both hemispheres 76.4
2249 Male, age 74, both hemispheres 76.3
1940 Female, age 85, left hemisphere 75.8
2437 Female, age 94, left hemisphere 75.7
2113 Female, age 91, right hemisphere 72.5
Hippocampus, CA3
nTPM: 76.6
2137 Male, age 80, left hemisphere 81.3
2620 Female, age 94, left hemisphere 78.8
2436 Male, age 74, both hemispheres 76.4
1867 Male, age 76, both hemispheres 75.3
2861 Female, age 67, both hemispheres 74.5
1891 Female, age 85, both hemispheres 73.4
Parahippocampal cortex
nTPM: 73.9
1850 Male, age 80, both hemispheres 79.1
1990 Female, age 91, right hemisphere 74.9
2250 Female, age 67, right hemisphere 74.7
1933 Female, age 85, both hemispheres 74.4
2245 Female, age 91, both hemispheres 74.3
2532 Female, age 72, left hemisphere 74.1
2693 Female, age 94, both hemispheres 73.8
2018 Male, age 76, both hemispheres 72.4
2692 Male, age 74, both hemispheres 71.4
2622 Female, age 67, right hemisphere 70.1
Perirhinal gyrus
nTPM: 77.9
1794 Male, age 80, right hemisphere 83.4
1847 Female, age 91, left hemisphere 78.8
2521 Female, age 94, right hemisphere 77.1
1841 Female, age 85, right hemisphere 76.9
2848 Male, age 76, right hemisphere 73.1
Subiculum
nTPM: 73.7
1901 Male, age 80, both hemispheres 78.4
1977 Female, age 85, both hemispheres 77.4
2619 Male, age 74, both hemispheres 73.9
2729 Female, age 91, right hemisphere 71.8
2042 Male, age 76, both hemispheres 71.5
2438 Female, age 94, left hemisphere 69.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.6
Samples: 197

Max nTPM: 118.0
Min nTPM: 36.5
Std nTPM: 12.3
Median nTPM: 58.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 118.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 109.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 98.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 93.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 91.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 90.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 86.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 84.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 82.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 79.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 78.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.9
FF:10169-103B7 60 years, female 29.2
FF:10153-102I9 76 years, female 26.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 62.2
Min nTPM: 35.9
Sample A Female 62.2
Sample B Female 50.4
Sample C Male 42.8
Sample D Male 35.9
Entorhinal cortex
nTPM: 37.1
Samples: 4

Max nTPM: 41.4
Min nTPM: 28.8
Sample A Female 41.4
Sample B Female 40.7
Sample C Male 37.3
Sample D Male 28.8
Subiculum
nTPM: 30.7
Samples: 4

Max nTPM: 39.7
Min nTPM: 25.1
Sample A Female 39.7
Sample B Female 25.5
Sample C Male 32.3
Sample D Male 25.1
Ventral hippocampus
nTPM: 44.8
Samples: 4

Max nTPM: 55.3
Min nTPM: 30.0
Sample A Female 42.9
Sample B Female 30.0
Sample C Male 51.0
Sample D Male 55.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 84.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 84.3
Samples: 4

Max nTPM: 89.8
Min nTPM: 80.7
Sample A Male 80.7
Sample B Male 83.9
Sample C Female 82.8
Sample D Female 89.8
Hippocampal formation
nTPM: 83.1
Samples: 4

Max nTPM: 87.4
Min nTPM: 75.1
Sample A Male 84.2
Sample B Male 75.1
Sample C Female 87.4
Sample D Female 85.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
545095 Antisense, RP_040825_02_C07, Mouse strain C57BL/6J (56 days, male) 4.6

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