PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:137.3 nTPM
HPA:137.3 nTPM
FANTOM5:240.8 Scaled Tags Per Million
Pig:91.1 nTPM
Mouse:227.9 nTPM
Allen mouse:5.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 137.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 110.0
2301 Female, age 85, both hemispheres 112.7
2090 Male, age 80, both hemispheres 111.2
2188 Female, age 91, both hemispheres 110.9
1984 Male, age 76, both hemispheres 105.2
Area postrema
nTPM: 116.9
2799 Male, age 61, both hemispheres 128.9
2306 Male, age 80, both hemispheres 116.0
2054 Male, age 76, both hemispheres 105.7
Cuneate nuclei
nTPM: 106.6
2376 Male, age 61, both hemispheres 110.1
2381 Male, age 80, both hemispheres 109.6
2131 Male, age 76, both hemispheres 100.1
Dorsal cochlear nucleus
nTPM: 110.2
2187 Female, age 91, both hemispheres 118.1
2370 Male, age 61, both hemispheres 113.3
2378 Male, age 80, both hemispheres 108.1
2802 Male, age 74, right hemisphere 107.5
2058 Male, age 76, both hemispheres 104.2
Dorsal medullary reticular nucleus
nTPM: 105.9
2040 Female, age 85, both hemispheres 113.6
2373 Male, age 61, both hemispheres 105.7
2088 Male, age 76, both hemispheres 98.5
Dorsal motor vagal complex
nTPM: 104.7
2813 Female, age 72, unknown 111.6
2133 Female, age 91, both hemispheres 108.5
2000 Male, age 74, unknown 106.8
2844 Male, age 55, unknown 106.1
2185 Male, age 76, both hemispheres 104.1
2807 Female, age 85, both hemispheres 101.6
2797 Male, age 61, both hemispheres 99.7
2643 Male, age 74, both hemispheres 99.5
Dorsal tegmental nucleus
nTPM: 116.2
2358 Male, age 61, both hemispheres 130.2
2083 Male, age 80, both hemispheres 114.1
2326 Male, age 74, both hemispheres 111.9
1936 Male, age 76, left hemisphere 108.6
Dorsolateral tegmental area
nTPM: 114.4
2751 Female, age 85, both hemispheres 120.4
2337 Male, age 61, both hemispheres 114.8
2360 Male, age 74, both hemispheres 114.3
2654 Male, age 80, both hemispheres 112.2
2141 Male, age 76, both hemispheres 110.2
Gigantocellular reticular nuclei, medullary
nTPM: 110.1
2314 Male, age 61, both hemispheres 123.3
1876 Female, age 85, both hemispheres 115.7
2462 Male, age 74, both hemispheres 112.2
2387 Female, age 91, both hemispheres 107.3
2022 Male, age 76, right hemisphere 101.4
2310 Male, age 80, both hemispheres 100.9
Gigantocellular reticular nuclei, pars
nTPM: 105.8
2336 Male, age 61, both hemispheres 109.8
2084 Female, age 85, both hemispheres 109.6
2168 Male, age 76, both hemispheres 104.3
2330 Male, age 80, both hemispheres 102.6
2706 Male, age 80, both hemispheres 102.6
Inferior olive
nTPM: 121.0
2563 Male, age 74, both hemispheres 129.9
2178 Male, age 61, both hemispheres 128.7
2628 Female, age 91, both hemispheres 117.9
2085 Female, age 85, both hemispheres 117.0
2379 Male, age 80, both hemispheres 111.5
Kolliker-Fuse nucleus
nTPM: 122.0
2315 Male, age 76, right hemisphere 144.9
2793 Female, age 91, left hemisphere 111.1
2163 Male, age 80, both hemispheres 110.1
Lateral lemniscal nuclei
nTPM: 102.7
2169 Male, age 76, both hemispheres 107.4
2746 Female, age 85, left hemisphere 105.8
2453 Male, age 74, right hemisphere 102.2
2320 Female, age 91, left hemisphere 99.1
2036 Male, age 80, both hemispheres 98.8
Lateral medullary reticular nucleus
nTPM: 124.6
2305 Male, age 74, both hemispheres 147.0
2374 Male, age 61, both hemispheres 125.1
2190 Female, age 85, both hemispheres 123.2
2852 Male, age 80, both hemispheres 120.1
2804 Female, age 91, both hemispheres 118.6
2044 Male, age 76, both hemispheres 113.5
Lateral parabrachial nucleus
nTPM: 120.8
2792 Male, age 76, both hemispheres 128.3
2790 Male, age 61, both hemispheres 126.3
2139 Female, age 85, right hemisphere 116.3
2013 Male, age 80, both hemispheres 112.6
Lateral vestibular nucleus
nTPM: 110.7
2311 Male, age 80, both hemispheres 115.8
2184 Male, age 76, both hemispheres 105.5
Locus coeruleus
nTPM: 114.2
2788 Male, age 74, unknown 125.9
2014 Male, age 55, unknown 117.2
2123 Female, age 91, both hemispheres 116.7
1980 Male, age 76, both hemispheres 112.4
2317 Female, age 72, unknown 109.4
2720 Male, age 74, both hemispheres 109.2
2162 Male, age 80, both hemispheres 108.9
Medial olivary nucleus
nTPM: 136.8
1943 Male, age 61, both hemispheres 153.1
1962 Male, age 76, both hemispheres 138.2
2138 Female, age 91, both hemispheres 130.2
2851 Male, age 80, both hemispheres 126.0
Medial parabrachial nucleus
nTPM: 115.9
2170 Female, age 91, both hemispheres 124.3
2156 Male, age 61, both hemispheres 119.5
2854 Male, age 80, both hemispheres 118.5
2463 Female, age 85, right hemisphere 109.8
2786 Male, age 76, both hemispheres 107.6
Medial periolivary nuclei
nTPM: 110.2
2791 Male, age 74, right hemisphere 127.5
2171 Female, age 85, both hemispheres 108.4
2063 Male, age 76, both hemispheres 107.8
2081 Male, age 80, both hemispheres 106.1
2458 Female, age 91, both hemispheres 101.4
Medial vestibular nucleus
nTPM: 118.1
2801 Male, age 74, both hemispheres 137.3
2624 Male, age 61, both hemispheres 119.3
2803 Female, age 91, both hemispheres 117.2
2743 Female, age 85, both hemispheres 114.6
2093 Male, age 80, both hemispheres 111.0
2134 Male, age 76, both hemispheres 109.1
Motor facial nucleus
nTPM: 108.3
2365 Male, age 74, right hemisphere 123.9
2697 Female, age 85, both hemispheres 108.7
2126 Male, age 61, both hemispheres 107.5
2062 Male, age 76, both hemispheres 106.1
2795 Female, age 91, both hemispheres 104.2
2327 Male, age 80, both hemispheres 99.3
Motor hypoglossal nucleus
nTPM: 109.1
2125 Female, age 91, both hemispheres 114.3
2132 Female, age 85, both hemispheres 114.0
2461 Male, age 61, both hemispheres 108.6
2182 Male, age 80, both hemispheres 107.6
2277 Male, age 76, both hemispheres 101.0
Motor trigeminal nucleus
nTPM: 105.3
2335 Male, age 61, both hemispheres 113.4
2309 Male, age 76, both hemispheres 107.8
2079 Male, age 80, both hemispheres 102.3
2560 Male, age 74, both hemispheres 102.3
2321 Female, age 91, both hemispheres 100.9
Nuclei of the trapezoid body
nTPM: 104.9
1983 Male, age 76, both hemispheres 110.9
2166 Male, age 80, both hemispheres 105.1
2159 Male, age 61, both hemispheres 104.6
2735 Female, age 85, both hemispheres 102.7
2368 Female, age 91, both hemispheres 101.1
Nucleus ambiguus
nTPM: 113.7
2071 Male, age 76, both hemispheres 129.4
2096 Female, age 85, both hemispheres 98.0
Nucleus cuneatus
nTPM: 109.6
2808 Female, age 85, both hemispheres 121.6
2380 Male, age 80, both hemispheres 119.5
2564 Male, age 74, both hemispheres 112.9
2562 Male, age 61, both hemispheres 103.8
2100 Male, age 76, both hemispheres 101.6
2805 Female, age 91, both hemispheres 98.0
Nucleus gracilis
nTPM: 116.4
2627 Male, age 74, both hemispheres 136.6
2382 Male, age 80, both hemispheres 110.9
2299 Female, age 85, both hemispheres 101.7
Nucleus raphe magnus
nTPM: 108.3
2455 Male, age 74, both hemispheres 118.8
2051 Male, age 76, both hemispheres 118.0
2160 Male, age 61, both hemispheres 105.6
2328 Male, age 80, both hemispheres 105.6
2172 Female, age 85, both hemispheres 101.8
2459 Female, age 91, both hemispheres 99.9
Nucleus raphe obscurus
nTPM: 127.6
2142 Male, age 76, midline 131.4
2845 Female, age 85, midline 128.0
2800 Male, age 61, midline 123.4
Nucleus raphe pallidus
nTPM: 137.3
1924 Male, age 61, midline 167.3
2145 Male, age 76, midline 126.3
2183 Male, age 80, midline 118.3
Nucleus tractus solitarii
nTPM: 108.1
2144 Female, age 91, right hemisphere 130.5
2191 Female, age 85, both hemispheres 102.0
2656 Male, age 76, both hemispheres 101.8
2307 Male, age 80, both hemispheres 98.0
Paramedian reticular nucleus
nTPM: 115.3
2052 Male, age 76, both hemispheres 129.6
2050 Female, age 85, both hemispheres 113.0
2313 Male, age 61, both hemispheres 109.5
2057 Male, age 80, both hemispheres 109.0
Parvicellular reticular nuclei
nTPM: 108.9
2119 Male, age 80, both hemispheres 115.3
2095 Male, age 76, both hemispheres 115.1
2558 Male, age 74, both hemispheres 96.4
Parvicellular reticular nuclei, medullary
nTPM: 108.1
2189 Female, age 91, both hemispheres 111.2
2091 Female, age 85, both hemispheres 107.3
2181 Male, age 80, left hemisphere 105.7
Peritrigeminal nucleus
nTPM: 122.7
2067 Female, age 85, both hemispheres 125.7
2179 Male, age 61, both hemispheres 123.4
2136 Male, age 76, both hemispheres 119.0
Pontine nuclei
nTPM: 107.9
2454 Male, age 74, left hemisphere 115.7
1863 Male, age 55, unknown 114.4
2109 Female, age 72, unknown 112.3
2319 Female, age 91, both hemispheres 105.9
2787 Female, age 85, both hemispheres 104.8
1968 Male, age 76, left hemisphere 103.8
2727 Male, age 61, right hemisphere 103.6
2115 Male, age 80, left hemisphere 102.6
Pontine raphe nucleus
nTPM: 113.5
2853 Male, age 76, midline 119.3
2122 Female, age 85, midline 107.7
Posteroventral cochlear nucleus
nTPM: 110.8
2341 Male, age 80, both hemispheres 120.2
2371 Male, age 61, both hemispheres 111.4
2070 Male, age 76, both hemispheres 108.1
2135 Female, age 91, both hemispheres 107.7
2752 Female, age 85, both hemispheres 106.4
Prepositus hypoglossal nucleus
nTPM: 114.5
2855 Female, age 85, right hemisphere 123.6
2086 Male, age 80, both hemispheres 105.5
Principal sensory trigeminal nucleus
nTPM: 105.2
2324 Male, age 76, both hemispheres 106.6
2367 Female, age 91, left hemisphere 106.3
2158 Male, age 61, both hemispheres 105.2
2008 Male, age 80, left hemisphere 102.7
Reticular pontine nucleus, caudal
nTPM: 108.4
2092 Male, age 76, both hemispheres 114.6
2559 Male, age 74, both hemispheres 111.1
2457 Female, age 91, both hemispheres 110.0
2332 Male, age 80, right hemisphere 97.9
Reticular pontine nucleus, oral
nTPM: 113.0
1939 Male, age 80, both hemispheres 120.1
2167 Male, age 76, both hemispheres 114.5
2361 Male, age 74, both hemispheres 112.5
2012 Female, age 85, both hemispheres 110.9
2366 Female, age 91, both hemispheres 107.0
Reticulotegmental nucleus
nTPM: 104.4
2325 Male, age 76, both hemispheres 108.1
2322 Female, age 91, both hemispheres 107.4
2333 Male, age 80, both hemispheres 103.3
2452 Male, age 74, both hemispheres 98.9
Spinal trigeminal nucleus, caudal
nTPM: 107.8
2390 Female, age 91, both hemispheres 110.9
2312 Male, age 61, both hemispheres 110.0
2642 Male, age 74, both hemispheres 109.0
2308 Male, age 80, both hemispheres 107.5
2447 Male, age 76, both hemispheres 101.6
Spinal trigeminal nucleus, interpolar
nTPM: 109.4
2066 Male, age 76, right hemisphere 112.8
2625 Male, age 61, both hemispheres 111.9
2386 Female, age 85, both hemispheres 109.5
2033 Male, age 80, both hemispheres 108.9
2389 Female, age 91, both hemispheres 104.0
Spinal trigeminal nucleus, oral
nTPM: 104.2
2737 Female, age 85, both hemispheres 105.3
2164 Male, age 80, both hemispheres 104.4
1978 Male, age 76, both hemispheres 102.9
Spinal vestibular nucleus
nTPM: 110.3
2806 Female, age 85, both hemispheres 116.0
2748 Male, age 76, both hemispheres 111.6
2796 Male, age 61, both hemispheres 110.2
2780 Male, age 80, both hemispheres 109.5
2186 Female, age 91, both hemispheres 109.2
2384 Male, age 74, both hemispheres 105.3
Subcoeruleus area
nTPM: 108.8
2369 Female, age 85, left hemisphere 118.6
1958 Male, age 80, both hemispheres 114.4
2323 Female, age 91, left hemisphere 109.8
2451 Male, age 74, both hemispheres 100.9
2089 Male, age 76, left hemisphere 100.5
Superior olive
nTPM: 110.4
2364 Male, age 74, right hemisphere 128.5
1875 Female, age 85, both hemispheres 110.6
2020 Male, age 76, both hemispheres 110.5
2329 Male, age 80, right hemisphere 103.6
2561 Female, age 91, both hemispheres 98.8
Superior vestibular nucleus
nTPM: 124.1
2383 Male, age 74, both hemispheres 143.1
2015 Male, age 80, both hemispheres 115.6
2061 Male, age 76, both hemispheres 113.5
Ventral medullary reticular nucleus
nTPM: 109.9
2372 Male, age 61, both hemispheres 112.9
2060 Male, age 76, both hemispheres 107.0
Ventral periolivary nuclei
nTPM: 106.7
2023 Male, age 76, both hemispheres 112.9
2165 Male, age 80, both hemispheres 109.1
2130 Female, age 85, both hemispheres 106.5
2794 Female, age 91, left hemisphere 98.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 116.3
2180 Male, age 61, both hemispheres 122.6
1986 Male, age 76, both hemispheres 120.8
2741 Female, age 85, both hemispheres 116.7
2302 Female, age 91, both hemispheres 111.5
2118 Male, age 80, both hemispheres 110.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 110.9
2359 Male, age 61, both hemispheres 122.8
2840 Female, age 85, both hemispheres 115.1
1959 Male, age 76, both hemispheres 111.3
2449 Male, age 74, both hemispheres 110.1
2161 Male, age 80, both hemispheres 105.7
2456 Female, age 91, both hemispheres 100.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 240.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 217.1
FF:10165-103B3 76 years, female 230.3
FF:10182-103D2 60 years, female 203.8
Medulla oblongata
Scaled Tags Per Million: 240.8
FF:10174-103C3 60 years, female 269.8
FF:10038-101F2 18-64 years, mixed 245.9
FF:10155-103A2 76 years, female 206.7
Pons
Scaled Tags Per Million: 225.5
FF:10033-101E6 18-54 years, mixed 225.5

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 91.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 91.1
Samples: 4

Max nTPM: 114.7
Min nTPM: 65.4
Sample A Female 82.3
Sample B Female 65.4
Sample C Male 101.8
Sample D Male 114.7
Pons
nTPM: 86.3
Samples: 4

Max nTPM: 101.2
Min nTPM: 53.2
Sample A Female 101.2
Sample B Female 53.2
Sample C Male 89.8
Sample D Male 101.1

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 227.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 227.9
Samples: 4

Max nTPM: 235.5
Min nTPM: 214.5
Sample A Male 232.0
Sample B Male 229.7
Sample C Female 214.5
Sample D Female 235.5

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.3
385777 Antisense, RP_040625_01_E05, Mouse strain C57BL/6J (56 days, male) 5.3
Pons
Expression energy: 5.2
385777 Antisense, RP_040625_01_E05, Mouse strain C57BL/6J (56 days, male) 5.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.