HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:651.0 nTPM
HPA:651.0 nTPM
GTEx:251.2 nTPM
FANTOM5:969.8 Scaled Tags Per Million
Pig:179.3 nTPM
Mouse:261.1 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006361Antibody CAB002572
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 651.0
Sample id Sample description nTPM
Hippocampus
nTPM: 644.9
1855 Male, age 76, left hemisphere 669.0
1898 Male, age 80, left hemisphere 656.8
2529 Female, age 94, left hemisphere 649.6
2621 Female, age 67, right hemisphere 646.4
1911 Female, age 85, right hemisphere 636.8
2148 Female, age 91, left hemisphere 611.1
Dentate gyrus
nTPM: 634.6
2010 Male, age 76, both hemispheres 669.6
2530 Female, age 94, left hemisphere 655.6
2528 Male, age 74, both hemispheres 630.2
1927 Female, age 91, both hemispheres 621.2
2531 Female, age 67, both hemispheres 616.4
2246 Female, age 85, both hemispheres 614.5
Entorhinal gyrus
nTPM: 629.5
2117 Female, age 91, right hemisphere 677.1
1787 Male, age 76, left hemisphere 661.7
1938 Female, age 85, left hemisphere 627.5
2764 Male, age 80, right hemisphere 618.6
2686 Male, age 75, right hemisphere 609.6
2613 Female, age 94, left hemisphere 582.3
Hippocampus, CA1
nTPM: 621.8
2045 Male, age 76, both hemispheres 661.7
1873 Female, age 85, both hemispheres 624.7
2527 Male, age 74, both hemispheres 622.1
2082 Female, age 91, right hemisphere 617.1
2749 Male, age 80, left hemisphere 583.2
Hippocampus, CA2
nTPM: 651.0
2437 Female, age 94, left hemisphere 666.0
1892 Male, age 76, both hemispheres 665.9
1940 Female, age 85, left hemisphere 664.1
2249 Male, age 74, both hemispheres 653.7
2113 Female, age 91, right hemisphere 630.5
1963 Male, age 80, left hemisphere 625.8
Hippocampus, CA3
nTPM: 631.9
1867 Male, age 76, both hemispheres 686.9
1891 Female, age 85, both hemispheres 649.3
2861 Female, age 67, both hemispheres 641.2
2436 Male, age 74, both hemispheres 633.2
2137 Male, age 80, left hemisphere 595.5
2620 Female, age 94, left hemisphere 585.6
Parahippocampal cortex
nTPM: 623.0
2018 Male, age 76, both hemispheres 686.8
1850 Male, age 80, both hemispheres 642.8
2250 Female, age 67, right hemisphere 641.4
1990 Female, age 91, right hemisphere 628.7
2693 Female, age 94, both hemispheres 623.5
1933 Female, age 85, both hemispheres 609.3
2245 Female, age 91, both hemispheres 607.1
2692 Male, age 74, both hemispheres 602.0
2532 Female, age 72, left hemisphere 600.3
2622 Female, age 67, right hemisphere 587.8
Perirhinal gyrus
nTPM: 638.0
2848 Male, age 76, right hemisphere 661.5
2521 Female, age 94, right hemisphere 643.0
1794 Male, age 80, right hemisphere 632.2
1841 Female, age 85, right hemisphere 628.9
1847 Female, age 91, left hemisphere 624.5
Subiculum
nTPM: 641.6
2042 Male, age 76, both hemispheres 685.2
2438 Female, age 94, left hemisphere 652.2
2729 Female, age 91, right hemisphere 646.6
1901 Male, age 80, both hemispheres 631.8
2619 Male, age 74, both hemispheres 618.7
1977 Female, age 85, both hemispheres 615.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 251.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 251.2
Samples: 197

Max nTPM: 1423.8
Min nTPM: 25.0
Std nTPM: 171.3
Median nTPM: 228.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 1423.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 951.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 921.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 753.6
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 645.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 598.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 568.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 548.7
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 526.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 518.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 506.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 969.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 969.8
FF:10169-103B7 60 years, female 1025.4
FF:10153-102I9 76 years, female 914.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 179.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 179.3
Samples: 4

Max nTPM: 228.1
Min nTPM: 143.2
Sample A Female 228.1
Sample B Female 143.2
Sample C Male 189.5
Sample D Male 156.3
Entorhinal cortex
nTPM: 173.8
Samples: 4

Max nTPM: 207.0
Min nTPM: 135.9
Sample A Female 162.3
Sample B Female 207.0
Sample C Male 190.1
Sample D Male 135.9
Subiculum
nTPM: 150.2
Samples: 4

Max nTPM: 177.5
Min nTPM: 115.9
Sample A Female 177.5
Sample B Female 115.9
Sample C Male 138.4
Sample D Male 169.1
Ventral hippocampus
nTPM: 169.7
Samples: 4

Max nTPM: 211.8
Min nTPM: 134.5
Sample A Female 153.4
Sample B Female 134.5
Sample C Male 211.8
Sample D Male 179.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 261.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 261.1
Samples: 4

Max nTPM: 270.6
Min nTPM: 253.5
Sample A Male 270.6
Sample B Male 253.5
Sample C Female 261.3
Sample D Female 258.9
Hippocampal formation
nTPM: 248.0
Samples: 4

Max nTPM: 274.7
Min nTPM: 231.9
Sample A Male 236.3
Sample B Male 231.9
Sample C Female 274.7
Sample D Female 249.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
70305443 Antisense, RP_050609_04_B12, Mouse strain C57BL/6J (56 days, male) 2.1
71924291 Antisense, RP_050609_04_B12, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

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