HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:53.1 nTPM
HPA:53.1 nTPM
GTEx:197.5 nTPM
FANTOM5:265.3 Scaled Tags Per Million
Pig:35.7 nTPM
Mouse:22.3 nTPM
Allen mouse:16.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061571
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.1
Sample id Sample description nTPM
Hippocampus
nTPM: 47.7
2148 Female, age 91, left hemisphere 57.8
2621 Female, age 67, right hemisphere 53.7
1911 Female, age 85, right hemisphere 50.7
2529 Female, age 94, left hemisphere 48.2
1855 Male, age 76, left hemisphere 47.0
1898 Male, age 80, left hemisphere 28.9
Dentate gyrus
nTPM: 50.8
2531 Female, age 67, both hemispheres 66.0
2246 Female, age 85, both hemispheres 57.6
2530 Female, age 94, left hemisphere 49.3
2528 Male, age 74, both hemispheres 47.1
2010 Male, age 76, both hemispheres 43.5
1927 Female, age 91, both hemispheres 41.5
Entorhinal gyrus
nTPM: 48.4
2613 Female, age 94, left hemisphere 59.7
2686 Male, age 75, right hemisphere 55.3
1787 Male, age 76, left hemisphere 51.5
2764 Male, age 80, right hemisphere 48.6
2117 Female, age 91, right hemisphere 42.9
1938 Female, age 85, left hemisphere 32.2
Hippocampus, CA1
nTPM: 48.0
2082 Female, age 91, right hemisphere 65.2
2045 Male, age 76, both hemispheres 57.3
1873 Female, age 85, both hemispheres 44.1
2527 Male, age 74, both hemispheres 41.6
2749 Male, age 80, left hemisphere 31.8
Hippocampus, CA2
nTPM: 45.8
2113 Female, age 91, right hemisphere 58.4
1940 Female, age 85, left hemisphere 55.9
2437 Female, age 94, left hemisphere 48.2
2249 Male, age 74, both hemispheres 45.2
1892 Male, age 76, both hemispheres 35.5
1963 Male, age 80, left hemisphere 31.4
Hippocampus, CA3
nTPM: 53.1
2620 Female, age 94, left hemisphere 72.2
2861 Female, age 67, both hemispheres 56.0
2436 Male, age 74, both hemispheres 55.0
1891 Female, age 85, both hemispheres 48.1
1867 Male, age 76, both hemispheres 44.4
2137 Male, age 80, left hemisphere 42.8
Parahippocampal cortex
nTPM: 50.2
2622 Female, age 67, right hemisphere 72.0
2693 Female, age 94, both hemispheres 55.9
2692 Male, age 74, both hemispheres 55.5
2018 Male, age 76, both hemispheres 54.0
2245 Female, age 91, both hemispheres 51.7
2532 Female, age 72, left hemisphere 50.4
2250 Female, age 67, right hemisphere 46.1
1990 Female, age 91, right hemisphere 44.0
1850 Male, age 80, both hemispheres 37.5
1933 Female, age 85, both hemispheres 35.1
Perirhinal gyrus
nTPM: 37.4
2848 Male, age 76, right hemisphere 47.0
2521 Female, age 94, right hemisphere 41.5
1794 Male, age 80, right hemisphere 33.9
1841 Female, age 85, right hemisphere 32.9
1847 Female, age 91, left hemisphere 31.7
Subiculum
nTPM: 50.3
2042 Male, age 76, both hemispheres 63.2
2729 Female, age 91, right hemisphere 56.1
2619 Male, age 74, both hemispheres 51.4
2438 Female, age 94, left hemisphere 46.7
1901 Male, age 80, both hemispheres 45.4
1977 Female, age 85, both hemispheres 39.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 197.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 197.5
Samples: 197

Max nTPM: 404.4
Min nTPM: 14.6
Std nTPM: 67.1
Median nTPM: 189.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 404.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 389.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 387.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 384.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 353.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 336.8
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 325.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 322.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 322.2
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 320.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 319.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 265.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 265.3
FF:10153-102I9 76 years, female 328.8
FF:10169-103B7 60 years, female 201.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.9
Samples: 4

Max nTPM: 40.5
Min nTPM: 30.1
Sample A Female 30.1
Sample B Female 33.8
Sample C Male 40.5
Sample D Male 35.0
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 38.1
Min nTPM: 22.5
Sample A Female 27.9
Sample B Female 27.8
Sample C Male 22.5
Sample D Male 38.1
Subiculum
nTPM: 33.2
Samples: 4

Max nTPM: 38.9
Min nTPM: 24.4
Sample A Female 24.4
Sample B Female 36.5
Sample C Male 33.0
Sample D Male 38.9
Ventral hippocampus
nTPM: 35.8
Samples: 4

Max nTPM: 41.8
Min nTPM: 32.5
Sample A Female 32.5
Sample B Female 34.3
Sample C Male 34.4
Sample D Male 41.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.1
Samples: 4

Max nTPM: 23.5
Min nTPM: 10.2
Sample A Male 18.1
Sample B Male 23.5
Sample C Female 20.7
Sample D Female 10.2
Hippocampal formation
nTPM: 22.2
Samples: 4

Max nTPM: 28.5
Min nTPM: 11.8
Sample A Male 28.5
Sample B Male 21.7
Sample C Female 11.8
Sample D Female 26.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.7
77620457 Antisense, RP_070129_03_D05, Mouse strain C57BL/6J (56 days, male) 16.7

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