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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 551.5
Min nTPM: 41.6
Std nTPM: 111.9
Median nTPM:
319_1
81 years, male
551.5
218_1
71 years, female
549.1
322_1
76 years, male
518.8
320_1
89 years, female
511.9
352_1
62 years, male
490.2
163_1
78 years, male
464.9
353_1
82 years, female
434.2
354_1
81 years, female
428.7
316_1
62 years, male
426.6
355_1
70 years, female
423.8
452_1
88 years, female
404.7
356_1
87 years, female
380.2
406_1
79 years, male
372.2
321_1
62 years, female
362.9
506_1
65 years, male
361.5
349_1
83 years, male
338.6
229_1
69 years, female
328.5
394_1
75 years, female
318.8
379_1
60 years, male
317.1
286_1
68 years, female
309.7
172_1
72 years, female
301.2
377_1
82 years, female
300.6
295_1
61 years, female
297.9
189_1
76 years, male
293.5
348_1
84 years, male
278.7
503_1
68 years, male
272.9
4_1
88 years, female
265.1
217_1
76 years, male
262.2
137_1
83 years, male
258.5
264_1
73 years, female
253.1
99_1
64 years, male
252.0
41_1
94 years, female
247.9
265_1
87 years, male
241.0
499_1
55 years, female
239.5
109_1
81 years, female
238.9
376_1
75 years, female
236.4
311_1
78 years, male
233.0
17_1
71 years, male
232.0
517_1
88 years, male
228.4
447_1
81 years, male
225.1
237_1
82 years, male
224.8
518_1
75 years, female
221.4
314_1
67 years, male
211.2
115_1
83 years, male
210.8
266_1
85 years, male
210.6
246_1
77 years, male
210.5
389_1
86 years, female
208.3
425_1
59 years, female
205.2
243_1
75 years, male
204.7
292_1
71 years, male
204.3
153_1
70 years, female
202.5
317_1
60 years, male
200.8
293_1
68 years, female
199.1
386_1
76 years, male
198.2
396_1
62 years, male
192.4
142_1
61 years, female
191.5
177_1
74 years, male
187.1
347_1
72 years, male
186.2
126_1
63 years, male
185.2
313_1
79 years, female
184.4
173_1
67 years, male
184.3
375_1
74 years, female
182.7
404_1
82 years, female
176.7
288_1
66 years, female
171.8
318_1
68 years, male
170.9
468_1
89 years, male
168.5
384_1
83 years, male
168.3
139_1
64 years, female
168.0
117_1
61 years, male
166.7
335_1
73 years, female
166.7
315_1
62 years, female
163.9
18_1
88 years, male
163.1
120_1
70 years, female
160.6
9_1
66 years, female
157.3
405_1
91 years, male
156.2
43_1
64 years, female
152.1
350_1
84 years, female
152.0
2_1
77 years, female
148.6
145_1
84 years, male
147.3
526_1
61 years, male
146.7
35_1
74 years, female
144.9
32_1
67 years, male
144.0
254_1
77 years, female
141.0
495_1
57 years, female
132.9
351_1
91 years, male
131.2
307_1
66 years, female
131.1
42_1
85 years, male
130.6
162_1
79 years, female
127.7
480_1
63 years, male
125.8
466_1
57 years, female
119.2
6_1
73 years, female
118.1
324_1
76 years, male
112.3
119_1
70 years, female
107.1
308_1
70 years, female
105.5
81_1
67 years, male
103.7
501_1
88 years, male
102.0
89_1
63 years, male
101.4
415_1
77 years, female
100.9
414_1
84 years, female
98.1
149_1
88 years, male
97.2
251_1
78 years, male
90.2
413_1
59 years, female
88.5
291_1
76 years, male
79.8
491_1
89 years, female
45.8
490_1
67 years, female
41.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.