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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:324.9 nTPM
FANTOM5:228.0 Scaled Tags Per Million
Pig:363.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB008713
Glial cells Medium
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 324.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 324.9
Samples: 246

Max nTPM: 682.6
Min nTPM: 160.7
Std nTPM: 77.0
Median nTPM: 313.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 682.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 660.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 617.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 578.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 554.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 541.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 537.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 493.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 490.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 484.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 476.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 467.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 457.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 457.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 453.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 448.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 445.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 441.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 439.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 435.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 429.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 422.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 413.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 410.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 409.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 407.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 406.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 405.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 402.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 400.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 399.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 398.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 392.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 392.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 392.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 390.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 390.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 388.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 388.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 388.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 388.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 384.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 384.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 381.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 380.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 378.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 375.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 375.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 375.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 374.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 373.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 372.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 367.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 366.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 364.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 364.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 364.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 364.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 364.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 362.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 360.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 360.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 360.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 359.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 356.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 355.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 352.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 352.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 351.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 349.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 349.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 349.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 349.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 346.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 345.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 344.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 344.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 343.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 342.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 341.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 341.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 339.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 338.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 338.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 338.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 338.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 338.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 335.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 335.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 333.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 333.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 332.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 331.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 331.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 330.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 328.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 327.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 327.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 327.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 326.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 326.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 326.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 325.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 324.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 324.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 323.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 322.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 322.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 322.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 321.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 321.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 321.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 320.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 320.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 318.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 317.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 316.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 316.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 315.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 315.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 315.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 314.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 313.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 312.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 312.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 312.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 311.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 309.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 309.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 309.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 308.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 307.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 306.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 305.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 305.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 305.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 304.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 304.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 303.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 303.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 303.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 302.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 302.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 302.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 300.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 298.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 298.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 296.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 295.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 294.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 294.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 294.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 293.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 293.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 292.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 292.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 291.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 291.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 290.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 290.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 289.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 289.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 287.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 287.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 286.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 286.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 286.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 286.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 285.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 285.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 285.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 285.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 285.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 284.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 283.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 283.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 283.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 282.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 281.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 280.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 279.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 278.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 277.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 276.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 276.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 275.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 274.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 273.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 273.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 272.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 272.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 272.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 271.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 269.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 268.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 268.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 266.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 265.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 265.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 265.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 264.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 264.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 263.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 263.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 263.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 263.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 261.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 261.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 259.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 258.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 257.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 257.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 257.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 256.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 256.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 253.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 253.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 252.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 251.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 249.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 248.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 248.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 248.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 247.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 245.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 245.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 244.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 240.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 237.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 236.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 230.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 230.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 230.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 226.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 224.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 220.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 218.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 214.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 214.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 211.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 203.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 194.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 181.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 175.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 170.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 160.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 228.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 228.0
FF:10164-103B2 76 years, female 228.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 363.3
Pig sample Sample description nTPM
Caudate
nTPM: 363.3
Samples: 4

Max nTPM: 452.3
Min nTPM: 309.9
Sample A Female 309.9
Sample B Female 363.8
Sample C Male 452.3
Sample D Male 327.2

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