HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:93.7 nTPM
HPA:93.7 nTPM
GTEx:102.0 nTPM
FANTOM5:1.1 Scaled Tags Per Million
Mouse:150.3 nTPM
Allen mouse:10.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001666
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.7
Sample id Sample description nTPM
Hippocampus
nTPM: 92.4
2529 Female, age 94, left hemisphere 96.3
2621 Female, age 67, right hemisphere 93.4
1898 Male, age 80, left hemisphere 93.1
1855 Male, age 76, left hemisphere 92.6
1911 Female, age 85, right hemisphere 90.3
2148 Female, age 91, left hemisphere 88.9
Dentate gyrus
nTPM: 91.3
2530 Female, age 94, left hemisphere 96.2
2246 Female, age 85, both hemispheres 94.4
2010 Male, age 76, both hemispheres 93.5
2531 Female, age 67, both hemispheres 89.1
1927 Female, age 91, both hemispheres 88.8
2528 Male, age 74, both hemispheres 85.9
Entorhinal gyrus
nTPM: 92.6
2686 Male, age 75, right hemisphere 100.2
1938 Female, age 85, left hemisphere 95.4
2613 Female, age 94, left hemisphere 91.6
2117 Female, age 91, right hemisphere 90.7
2764 Male, age 80, right hemisphere 90.6
1787 Male, age 76, left hemisphere 87.3
Hippocampus, CA1
nTPM: 91.2
2749 Male, age 80, left hemisphere 99.9
1873 Female, age 85, both hemispheres 94.6
2045 Male, age 76, both hemispheres 90.3
2082 Female, age 91, right hemisphere 85.8
2527 Male, age 74, both hemispheres 85.3
Hippocampus, CA2
nTPM: 88.8
1892 Male, age 76, both hemispheres 93.8
1940 Female, age 85, left hemisphere 90.8
2249 Male, age 74, both hemispheres 89.5
2437 Female, age 94, left hemisphere 88.1
2113 Female, age 91, right hemisphere 85.8
1963 Male, age 80, left hemisphere 84.5
Hippocampus, CA3
nTPM: 89.3
1891 Female, age 85, both hemispheres 96.5
2137 Male, age 80, left hemisphere 95.5
1867 Male, age 76, both hemispheres 93.9
2861 Female, age 67, both hemispheres 86.2
2620 Female, age 94, left hemisphere 83.2
2436 Male, age 74, both hemispheres 80.4
Parahippocampal cortex
nTPM: 93.7
2245 Female, age 91, both hemispheres 101.3
1850 Male, age 80, both hemispheres 97.5
2532 Female, age 72, left hemisphere 96.4
2692 Male, age 74, both hemispheres 94.6
2250 Female, age 67, right hemisphere 93.5
1933 Female, age 85, both hemispheres 92.9
1990 Female, age 91, right hemisphere 91.1
2018 Male, age 76, both hemispheres 91.1
2693 Female, age 94, both hemispheres 90.3
2622 Female, age 67, right hemisphere 87.9
Perirhinal gyrus
nTPM: 90.6
1841 Female, age 85, right hemisphere 97.0
2848 Male, age 76, right hemisphere 94.7
1794 Male, age 80, right hemisphere 91.5
1847 Female, age 91, left hemisphere 87.3
2521 Female, age 94, right hemisphere 82.4
Subiculum
nTPM: 93.6
2042 Male, age 76, both hemispheres 101.3
1901 Male, age 80, both hemispheres 97.6
2619 Male, age 74, both hemispheres 94.4
1977 Female, age 85, both hemispheres 92.3
2438 Female, age 94, left hemisphere 92.1
2729 Female, age 91, right hemisphere 84.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 102.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 102.0
Samples: 197

Max nTPM: 187.5
Min nTPM: 62.2
Std nTPM: 20.3
Median nTPM: 98.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 187.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 173.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 159.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 157.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 154.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 145.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 145.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 144.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 143.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 140.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 138.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.1
FF:10153-102I9 76 years, female 1.1
FF:10169-103B7 60 years, female 1.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 150.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 146.4
Samples: 4

Max nTPM: 155.8
Min nTPM: 129.7
Sample A Male 148.8
Sample B Male 155.8
Sample C Female 129.7
Sample D Female 151.2
Hippocampal formation
nTPM: 150.3
Samples: 4

Max nTPM: 174.2
Min nTPM: 134.0
Sample A Male 134.0
Sample B Male 174.2
Sample C Female 152.8
Sample D Female 140.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.2
68161477 Antisense, RP_041122_01_E07, Mouse strain C57BL/6J (56 days, male) 10.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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