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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 406.9
Min nTPM: 183.3
Std nTPM: 46.7
Median nTPM:
41_1
94 years, female
406.9
218_1
71 years, female
396.4
384_1
83 years, male
384.9
2_1
77 years, female
381.0
379_1
60 years, male
376.3
495_1
57 years, female
374.7
173_1
67 years, male
358.2
322_1
76 years, male
354.6
145_1
84 years, male
350.5
308_1
70 years, female
346.3
375_1
74 years, female
346.0
120_1
70 years, female
340.9
307_1
66 years, female
339.6
447_1
81 years, male
339.0
139_1
64 years, female
330.5
17_1
71 years, male
328.8
4_1
88 years, female
328.2
237_1
82 years, male
327.8
35_1
74 years, female
326.7
315_1
62 years, female
325.7
347_1
72 years, male
324.9
295_1
61 years, female
323.6
316_1
62 years, male
322.5
42_1
85 years, male
320.1
119_1
70 years, female
318.8
321_1
62 years, female
314.9
6_1
73 years, female
314.6
117_1
61 years, male
311.7
137_1
83 years, male
306.4
311_1
78 years, male
304.2
317_1
60 years, male
303.2
377_1
82 years, female
302.4
153_1
70 years, female
300.9
319_1
81 years, male
300.9
452_1
88 years, female
299.7
324_1
76 years, male
299.6
386_1
76 years, male
297.7
189_1
76 years, male
293.0
491_1
89 years, female
290.6
376_1
75 years, female
290.2
396_1
62 years, male
287.2
414_1
84 years, female
286.1
126_1
63 years, male
285.5
501_1
88 years, male
283.0
313_1
79 years, female
282.9
506_1
65 years, male
281.6
99_1
64 years, male
281.3
389_1
86 years, female
281.0
394_1
75 years, female
279.6
162_1
79 years, female
278.3
109_1
81 years, female
273.5
415_1
77 years, female
273.2
518_1
75 years, female
272.3
265_1
87 years, male
271.7
490_1
67 years, female
270.6
526_1
61 years, male
270.2
177_1
74 years, male
268.3
89_1
63 years, male
267.5
413_1
59 years, female
265.7
480_1
63 years, male
263.0
351_1
91 years, male
260.2
314_1
67 years, male
260.1
115_1
83 years, male
259.6
243_1
75 years, male
259.5
406_1
79 years, male
258.0
499_1
55 years, female
257.9
229_1
69 years, female
257.0
354_1
81 years, female
256.8
142_1
61 years, female
256.6
404_1
82 years, female
256.6
335_1
73 years, female
256.4
350_1
84 years, female
254.2
264_1
73 years, female
253.9
348_1
84 years, male
253.4
81_1
67 years, male
251.4
349_1
83 years, male
250.7
320_1
89 years, female
249.7
288_1
66 years, female
248.6
43_1
64 years, female
248.2
246_1
77 years, male
246.6
254_1
77 years, female
245.9
18_1
88 years, male
245.0
266_1
85 years, male
244.4
353_1
82 years, female
243.4
163_1
78 years, male
241.9
468_1
89 years, male
241.5
172_1
72 years, female
239.0
466_1
57 years, female
233.9
286_1
68 years, female
232.4
405_1
91 years, male
228.1
425_1
59 years, female
227.5
251_1
78 years, male
226.6
503_1
68 years, male
226.3
318_1
68 years, male
225.2
9_1
66 years, female
224.2
292_1
71 years, male
222.2
293_1
68 years, female
221.0
291_1
76 years, male
218.5
352_1
62 years, male
217.2
356_1
87 years, female
214.1
517_1
88 years, male
211.6
32_1
67 years, male
211.2
355_1
70 years, female
209.9
217_1
76 years, male
208.4
149_1
88 years, male
183.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.