HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:63.4 nTPM
HPA:63.4 nTPM
GTEx:91.6 nTPM
FANTOM5:72.5 Scaled Tags Per Million
Pig:88.6 nTPM
Mouse:29.1 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043836
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 63.4
Sample id Sample description nTPM
Hippocampus
nTPM: 57.9
1898 Male, age 80, left hemisphere 61.4
2529 Female, age 94, left hemisphere 60.4
2621 Female, age 67, right hemisphere 58.0
2148 Female, age 91, left hemisphere 57.6
1855 Male, age 76, left hemisphere 57.2
1911 Female, age 85, right hemisphere 52.8
Dentate gyrus
nTPM: 57.4
2530 Female, age 94, left hemisphere 64.3
1927 Female, age 91, both hemispheres 60.7
2531 Female, age 67, both hemispheres 59.3
2246 Female, age 85, both hemispheres 54.4
2010 Male, age 76, both hemispheres 53.4
2528 Male, age 74, both hemispheres 52.1
Entorhinal gyrus
nTPM: 63.1
2613 Female, age 94, left hemisphere 70.0
2686 Male, age 75, right hemisphere 67.7
2764 Male, age 80, right hemisphere 66.9
1787 Male, age 76, left hemisphere 61.2
1938 Female, age 85, left hemisphere 60.5
2117 Female, age 91, right hemisphere 52.5
Hippocampus, CA1
nTPM: 58.0
2749 Male, age 80, left hemisphere 67.5
2082 Female, age 91, right hemisphere 56.4
2045 Male, age 76, both hemispheres 55.5
1873 Female, age 85, both hemispheres 55.4
2527 Male, age 74, both hemispheres 55.2
Hippocampus, CA2
nTPM: 57.8
1892 Male, age 76, both hemispheres 62.1
2437 Female, age 94, left hemisphere 61.7
1963 Male, age 80, left hemisphere 60.0
2113 Female, age 91, right hemisphere 55.8
1940 Female, age 85, left hemisphere 54.6
2249 Male, age 74, both hemispheres 52.6
Hippocampus, CA3
nTPM: 58.7
2620 Female, age 94, left hemisphere 68.2
2137 Male, age 80, left hemisphere 65.9
2861 Female, age 67, both hemispheres 62.8
1867 Male, age 76, both hemispheres 56.9
1891 Female, age 85, both hemispheres 51.0
2436 Male, age 74, both hemispheres 47.5
Parahippocampal cortex
nTPM: 60.6
2622 Female, age 67, right hemisphere 68.0
2245 Female, age 91, both hemispheres 62.6
2692 Male, age 74, both hemispheres 62.4
1850 Male, age 80, both hemispheres 62.3
2532 Female, age 72, left hemisphere 62.0
1990 Female, age 91, right hemisphere 60.2
2693 Female, age 94, both hemispheres 59.5
1933 Female, age 85, both hemispheres 58.9
2250 Female, age 67, right hemisphere 57.3
2018 Male, age 76, both hemispheres 53.2
Perirhinal gyrus
nTPM: 63.4
1794 Male, age 80, right hemisphere 72.1
1847 Female, age 91, left hemisphere 64.7
1841 Female, age 85, right hemisphere 64.6
2848 Male, age 76, right hemisphere 58.8
2521 Female, age 94, right hemisphere 57.0
Subiculum
nTPM: 57.3
2619 Male, age 74, both hemispheres 62.5
1977 Female, age 85, both hemispheres 59.8
1901 Male, age 80, both hemispheres 58.8
2438 Female, age 94, left hemisphere 58.2
2729 Female, age 91, right hemisphere 52.6
2042 Male, age 76, both hemispheres 52.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 91.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 91.6
Samples: 197

Max nTPM: 190.6
Min nTPM: 25.8
Std nTPM: 26.0
Median nTPM: 89.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 190.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 162.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 161.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 158.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 152.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 150.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 150.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 147.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 142.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 136.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 135.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.5
FF:10153-102I9 76 years, female 75.0
FF:10169-103B7 60 years, female 70.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 88.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 72.9
Samples: 4

Max nTPM: 82.2
Min nTPM: 56.8
Sample A Female 82.2
Sample B Female 71.5
Sample C Male 81.2
Sample D Male 56.8
Entorhinal cortex
nTPM: 88.6
Samples: 4

Max nTPM: 95.8
Min nTPM: 79.2
Sample A Female 84.2
Sample B Female 95.8
Sample C Male 95.3
Sample D Male 79.2
Subiculum
nTPM: 75.5
Samples: 4

Max nTPM: 102.3
Min nTPM: 61.8
Sample A Female 102.3
Sample B Female 67.0
Sample C Male 71.0
Sample D Male 61.8
Ventral hippocampus
nTPM: 73.7
Samples: 4

Max nTPM: 91.6
Min nTPM: 56.9
Sample A Female 63.2
Sample B Female 56.9
Sample C Male 91.6
Sample D Male 82.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 30.9
Min nTPM: 26.9
Sample A Male 29.8
Sample B Male 30.9
Sample C Female 28.8
Sample D Female 26.9
Hippocampal formation
nTPM: 26.9
Samples: 4

Max nTPM: 32.5
Min nTPM: 23.4
Sample A Male 32.5
Sample B Male 26.2
Sample C Female 23.4
Sample D Female 25.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
70598359 Antisense, RP_050407_04_D04, Mouse strain C57BL/6J (56 days, male) 10.4
74988737 Antisense, RP_060315_04_B05, Mouse strain C57BL/6J (56 days, male) 6.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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