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RPS21
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  • RPS21
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:1013.1 nTPM
FANTOM5:219.0 Scaled Tags Per Million
Pig:126.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003371
Glial cells Not detected
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1013.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1013.1
Samples: 246

Max nTPM: 3206.2
Min nTPM: 493.9
Std nTPM: 356.2
Median nTPM: 935.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 3206.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2894.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2570.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 2371.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2183.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 2161.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 2045.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1784.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1696.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1628.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1594.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1582.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1545.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1521.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1505.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1461.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1457.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1444.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1441.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1438.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1432.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1411.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1405.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1397.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1393.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1376.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1375.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1372.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1356.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1342.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1340.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1338.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1334.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1324.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1314.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1301.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1300.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1288.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1279.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1265.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1262.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1247.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1245.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1243.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1238.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1218.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1210.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1201.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1200.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1194.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1191.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1178.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1168.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1168.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1159.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1157.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1155.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1147.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1144.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1144.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1144.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1139.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1139.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1126.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1122.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1116.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1112.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1111.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1106.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1100.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1097.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1096.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1092.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1086.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1078.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1070.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1068.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1066.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1064.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1058.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1050.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1040.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1037.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1030.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1028.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1028.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1026.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1020.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1015.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1011.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1008.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1005.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1004.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1004.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 992.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 988.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 986.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 981.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 980.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 975.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 972.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 971.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 968.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 967.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 967.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 964.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 963.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 963.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 959.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 957.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 957.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 956.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 951.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 948.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 948.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 947.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 946.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 945.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 943.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 943.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 943.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 943.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 937.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 933.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 932.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 926.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 925.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 925.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 922.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 921.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 920.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 919.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 919.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 918.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 912.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 910.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 909.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 909.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 904.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 901.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 896.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 894.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 894.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 891.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 890.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 889.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 885.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 882.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 881.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 876.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 875.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 875.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 871.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 870.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 870.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 869.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 866.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 861.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 858.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 856.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 852.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 851.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 848.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 848.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 845.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 845.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 845.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 843.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 840.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 839.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 837.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 833.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 832.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 831.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 831.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 825.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 821.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 820.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 819.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 819.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 817.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 814.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 814.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 814.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 813.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 805.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 804.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 802.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 799.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 797.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 793.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 792.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 789.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 787.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 783.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 783.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 783.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 783.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 781.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 779.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 778.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 774.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 770.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 769.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 763.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 761.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 757.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 756.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 756.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 752.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 750.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 748.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 746.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 733.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 732.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 725.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 715.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 711.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 703.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 698.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 689.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 679.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 674.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 669.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 669.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 668.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 668.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 663.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 661.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 658.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 649.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 640.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 634.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 625.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 624.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 606.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 605.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 588.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 563.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 556.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 545.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 543.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 529.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 513.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 509.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 493.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 219.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 219.0
FF:10164-103B2 76 years, female 219.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 126.7
Pig sample Sample description nTPM
Caudate
nTPM: 126.7
Samples: 4

Max nTPM: 141.1
Min nTPM: 112.4
Sample A Female 126.1
Sample B Female 141.1
Sample C Male 127.2
Sample D Male 112.4

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