HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:629.0 nTPM
HPA:629.0 nTPM
GTEx:446.0 nTPM
FANTOM5:339.1 Scaled Tags Per Million
Pig:134.4 nTPM
Mouse:594.8 nTPM
Allen mouse:15.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036048Antibody CAB002427
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 629.0
Sample id Sample description nTPM
Hippocampus
nTPM: 601.2
1898 Male, age 80, left hemisphere 616.9
2529 Female, age 94, left hemisphere 603.9
1911 Female, age 85, right hemisphere 601.8
2621 Female, age 67, right hemisphere 599.6
2148 Female, age 91, left hemisphere 593.0
1855 Male, age 76, left hemisphere 592.0
Dentate gyrus
nTPM: 600.0
2530 Female, age 94, left hemisphere 653.9
2010 Male, age 76, both hemispheres 626.4
1927 Female, age 91, both hemispheres 588.7
2531 Female, age 67, both hemispheres 587.2
2246 Female, age 85, both hemispheres 576.5
2528 Male, age 74, both hemispheres 567.0
Entorhinal gyrus
nTPM: 578.7
2764 Male, age 80, right hemisphere 604.0
1787 Male, age 76, left hemisphere 595.7
2117 Female, age 91, right hemisphere 583.0
2613 Female, age 94, left hemisphere 579.5
1938 Female, age 85, left hemisphere 568.7
2686 Male, age 75, right hemisphere 541.6
Hippocampus, CA1
nTPM: 629.0
2749 Male, age 80, left hemisphere 735.6
2527 Male, age 74, both hemispheres 627.0
2045 Male, age 76, both hemispheres 608.0
2082 Female, age 91, right hemisphere 593.8
1873 Female, age 85, both hemispheres 580.4
Hippocampus, CA2
nTPM: 608.6
1963 Male, age 80, left hemisphere 678.0
2249 Male, age 74, both hemispheres 617.1
2437 Female, age 94, left hemisphere 601.2
2113 Female, age 91, right hemisphere 599.8
1892 Male, age 76, both hemispheres 596.1
1940 Female, age 85, left hemisphere 559.2
Hippocampus, CA3
nTPM: 626.6
2436 Male, age 74, both hemispheres 679.2
2137 Male, age 80, left hemisphere 667.1
2861 Female, age 67, both hemispheres 639.6
2620 Female, age 94, left hemisphere 608.2
1867 Male, age 76, both hemispheres 601.0
1891 Female, age 85, both hemispheres 564.3
Parahippocampal cortex
nTPM: 585.9
2018 Male, age 76, both hemispheres 647.3
2245 Female, age 91, both hemispheres 602.1
2532 Female, age 72, left hemisphere 600.5
2622 Female, age 67, right hemisphere 595.4
1850 Male, age 80, both hemispheres 582.2
1990 Female, age 91, right hemisphere 580.6
1933 Female, age 85, both hemispheres 570.9
2692 Male, age 74, both hemispheres 570.0
2250 Female, age 67, right hemisphere 566.1
2693 Female, age 94, both hemispheres 543.4
Perirhinal gyrus
nTPM: 597.4
1794 Male, age 80, right hemisphere 640.3
1841 Female, age 85, right hemisphere 601.1
1847 Female, age 91, left hemisphere 598.0
2521 Female, age 94, right hemisphere 596.9
2848 Male, age 76, right hemisphere 550.8
Subiculum
nTPM: 579.6
1901 Male, age 80, both hemispheres 590.9
2619 Male, age 74, both hemispheres 587.3
1977 Female, age 85, both hemispheres 585.5
2438 Female, age 94, left hemisphere 581.3
2729 Female, age 91, right hemisphere 574.0
2042 Male, age 76, both hemispheres 558.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 446.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 446.0
Samples: 197

Max nTPM: 979.2
Min nTPM: 212.5
Std nTPM: 135.4
Median nTPM: 423.4
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 979.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 967.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 824.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 823.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 781.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 751.6
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 712.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 682.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 674.2
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 665.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 649.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 339.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 339.1
FF:10169-103B7 60 years, female 349.4
FF:10153-102I9 76 years, female 328.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 134.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 134.4
Samples: 4

Max nTPM: 170.3
Min nTPM: 112.7
Sample A Female 170.3
Sample B Female 133.3
Sample C Male 121.3
Sample D Male 112.7
Entorhinal cortex
nTPM: 118.4
Samples: 4

Max nTPM: 131.5
Min nTPM: 98.1
Sample A Female 131.5
Sample B Female 120.9
Sample C Male 123.1
Sample D Male 98.1
Subiculum
nTPM: 108.2
Samples: 4

Max nTPM: 139.8
Min nTPM: 94.4
Sample A Female 139.8
Sample B Female 94.4
Sample C Male 103.0
Sample D Male 95.4
Ventral hippocampus
nTPM: 126.3
Samples: 4

Max nTPM: 157.5
Min nTPM: 83.6
Sample A Female 134.0
Sample B Female 83.6
Sample C Male 157.5
Sample D Male 129.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 594.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 553.0
Samples: 4

Max nTPM: 594.1
Min nTPM: 521.6
Sample A Male 521.6
Sample B Male 547.8
Sample C Female 548.3
Sample D Female 594.1
Hippocampal formation
nTPM: 594.8
Samples: 4

Max nTPM: 691.3
Min nTPM: 551.7
Sample A Male 551.7
Sample B Male 562.5
Sample C Female 573.7
Sample D Female 691.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.1
167 Antisense, RP_Baylor_102648, Mouse strain C57BL/6J (56 days, male) 15.1
166 Antisense, RP_Baylor_102648, Mouse strain C57BL/6J (56 days, male) 13.2

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The Human Protein Atlas

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