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TISSUE PRIMARY DATA KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Kidney
Tissue proteome
Kidney
KIDNEY - Expression summary
Protein expression
Kidneyi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Cells in glomeruli: Not detected
Cells in tubules: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:751.5 nTPM
HPA:751.5 nTPM
GTEx:590.0 nTPM
FANTOM5:37.0 Scaled Tags Per Million

KIDNEY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA034600
Cells in glomeruli Not detected
Cells in tubules Not detected



KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 751.5
overview
Female, age 58
Kidney sample 55
nTPM: 598.5
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 568.3
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 433.4
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 594
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 778.8
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 957.1
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 1536.3
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 545.3
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 751.9
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 590.0
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 587.7
Samples: 85

Max nTPM: 1273.1
Min nTPM: 221.1
Std nTPM: 225.7
Median nTPM: 535.3
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 1273.1
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 1177.5
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 1173.5
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 1148.1
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 1006.2
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 995.2
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 991.4
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 956.5
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 887.9
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 885.6
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 845.4
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 840.1
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 825.7
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 808.6
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 806.5
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 770.8
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 766.1
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 747.1
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 732.4
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 731.5
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 730.5
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 729.6
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 711.3
GTEX-13112-2126-SM-5GCO4 50-59 years, male 703.4
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 685.9
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 681.7
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 672.7
GTEX-O5YV-1226-SM-EV795 60-69 years, female 641.5
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 626.0
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 609.7
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 603.5
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 599.2
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 598.3
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 596.8
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 593.1
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 588.9
GTEX-14C39-2126-SM-664OH 40-49 years, male 562.1
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 555.9
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 550.1
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 541.6
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 540.1
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 539.6
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 535.3
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 534.4
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 527.3
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 526.1
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 522.7
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 515.9
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 511.6
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 505.8
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 504.1
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 486.7
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 485.0
GTEX-RN64-1626-SM-48FD7 50-59 years, male 481.0
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 464.6
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 464.4
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 451.3
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 450.0
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 445.1
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 445.0
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 440.2
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 439.1
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 417.0
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 415.1
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 412.7
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 406.6
GTEX-12696-0926-SM-5FQTV 60-69 years, male 405.6
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 396.3
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 393.4
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 383.4
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 382.9
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 367.3
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 361.3
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 356.1
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 352.7
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 352.3
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 349.2
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 344.0
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 334.1
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 320.3
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 320.0
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 316.1
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 302.5
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 278.6
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 221.1
Show allShow less
Kidney - Medulla
Average nTPM: 590.0
Samples: 4

Max nTPM: 717.5
Min nTPM: 261.6
Std nTPM: 189.9
Median nTPM: 690.4
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 717.5
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 696.9
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 683.9
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 261.6

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 37.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 37.0
FF:10017-101C8 60,62,63 years, female 37.0

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