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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:782.5 nTPM
GTEx:782.5 nTPM
FANTOM5:37.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA034600
Squamous epithelial cells Medium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 782.5
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 782.5
Samples: 156

Max nTPM: 1870.1
Min nTPM: 414.7
Std nTPM: 186.2
Median nTPM: 764.8
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 1870.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 1298.6
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 1221.7
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1177.6
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 1138.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1124.2
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 1108.6
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1073.6
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 1071.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1068.6
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1039.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 1032.8
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1023.0
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 1019.3
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1011.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 1004.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 999.9
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 993.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 991.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 987.2
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 984.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 983.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 975.2
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 973.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 970.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 956.0
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 940.9
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 929.0
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 925.8
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 913.1
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 913.1
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 910.7
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 906.1
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 901.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 898.5
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 897.7
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 893.8
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 890.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 889.3
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 882.3
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 878.9
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 866.8
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 860.5
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 856.0
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 855.1
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 852.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 850.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 843.1
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 840.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 830.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 829.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 826.5
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 826.0
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 825.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 824.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 815.3
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 813.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 812.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 810.0
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 808.6
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 808.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 808.0
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 807.6
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 806.9
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 805.7
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 805.0
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 803.0
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 799.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 791.1
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 789.1
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 787.5
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 780.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 777.4
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 776.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 775.6
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 770.5
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 768.0
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 767.6
GTEX-1C475-0526-SM-793AC 40-49 years, female 762.0
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 761.0
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 760.1
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 755.0
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 753.4
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 753.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 747.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 744.8
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 743.5
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 743.1
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 742.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 738.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 729.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 729.1
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 724.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 722.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 722.2
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 721.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 717.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 715.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 708.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 701.7
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 700.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 700.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 699.4
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 694.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 693.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 692.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 692.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 687.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 681.1
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 676.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 670.7
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 668.3
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 664.9
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 662.5
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 662.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 655.8
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 651.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 649.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 648.0
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 644.6
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 643.3
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 637.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 636.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 633.8
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 631.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 628.2
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 625.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 623.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 621.4
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 610.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 610.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 608.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 607.3
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 605.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 593.8
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 592.9
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 591.2
GTEX-QCQG-1226-SM-48U23 50-59 years, female 587.5
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 586.8
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 570.5
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 570.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 570.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 570.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 567.6
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 567.3
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 561.5
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 555.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 548.7
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 547.7
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 530.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 491.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 484.0
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 480.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 476.8
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 452.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 414.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 37.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 37.1
FF:10204-103F6 68 years, female 37.1

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.