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RPL4
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:507.9 nTPM
HPA:484.9 nTPM
GTEx:507.9 nTPM
FANTOM5:25.6 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA034600
Glandular cells Low


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 484.9
overview
Male, age 65
Small intestine sample 232
nTPM: 521.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 489.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 477.1
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 451.5

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 507.9
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 507.9
Samples: 187

Max nTPM: 1242.5
Min nTPM: 151.5
Std nTPM: 215.4
Median nTPM: 486.5
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1242.5
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1100.5
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 1085.2
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 1053.4
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1048.7
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1044.2
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 955.6
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 907.7
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 892.6
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 878.4
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 854.9
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 850.8
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 845.4
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 844.6
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 839.7
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 827.8
GTEX-183FY-1626-SM-793D8 20-29 years, male 827.3
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 814.1
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 811.6
GTEX-1192X-2526-SM-59868 50-59 years, male 792.8
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 772.6
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 761.6
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 757.3
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 748.5
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 746.7
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 745.7
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 731.7
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 730.6
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 729.4
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 714.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 709.6
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 704.7
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 702.9
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 702.2
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 701.7
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 695.6
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 688.7
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 686.6
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 680.6
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 680.0
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 676.0
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 674.4
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 673.7
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 673.5
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 661.8
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 656.3
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 650.4
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 641.9
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 639.6
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 632.2
GTEX-14PK6-1626-SM-6871I 70-79 years, female 631.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 629.4
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 628.6
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 625.9
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 622.5
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 613.4
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 612.9
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 610.2
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 600.7
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 591.0
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 586.2
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 584.8
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 581.2
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 577.8
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 577.1
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 575.8
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 573.4
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 573.2
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 572.5
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 567.3
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 567.0
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 565.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 560.6
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 551.3
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 547.0
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 542.8
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 539.5
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 525.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 523.8
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 520.7
GTEX-1C475-1426-SM-793CH 40-49 years, female 519.8
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 518.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 506.7
GTEX-14PKU-1626-SM-6871C 40-49 years, female 504.5
GTEX-13111-1426-SM-5DUW3 50-59 years, male 503.7
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 502.7
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 496.0
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 494.8
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 494.2
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 494.0
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 493.4
GTEX-13O61-1326-SM-5KM31 60-69 years, male 492.0
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 487.5
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 486.5
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 486.0
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 480.2
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 478.6
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 478.2
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 477.1
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 476.5
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 474.7
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 474.2
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 473.9
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 461.2
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 460.9
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 459.4
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 455.9
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 452.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 449.6
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 444.3
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 435.8
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 435.8
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 427.4
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 426.9
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 414.8
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 408.0
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 406.4
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 403.8
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 402.9
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 396.7
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 394.9
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 390.1
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 386.5
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 384.7
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 381.5
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 380.8
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 372.6
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 371.6
GTEX-13113-1226-SM-5EGHT 60-69 years, female 370.2
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 369.9
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 362.6
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 362.1
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 353.5
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 352.8
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 348.5
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 345.6
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 343.3
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 338.2
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 333.0
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 327.3
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 326.9
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 326.7
GTEX-144GM-1026-SM-79OKU 20-29 years, male 325.9
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 321.1
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 316.2
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 314.8
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 313.1
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 313.1
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 310.8
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 309.3
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 308.2
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 308.0
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 305.3
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 304.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 303.9
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 298.6
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 296.8
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 296.3
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 291.9
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 286.5
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 285.4
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 273.6
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 270.2
GTEX-14PN3-2026-SM-68729 60-69 years, female 269.0
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 257.5
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 256.6
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 255.7
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 252.3
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 244.9
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 242.9
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 233.5
GTEX-YFCO-1326-SM-664NV 40-49 years, male 230.2
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 230.0
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 223.4
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 220.6
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 218.7
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 218.3
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 217.8
GTEX-1122O-1326-SM-5H11F 60-69 years, female 208.4
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 205.5
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 204.8
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 192.6
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 186.1
GTEX-ZTSS-0926-SM-59865 40-49 years, male 167.2
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 157.5
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 155.3
GTEX-111YS-1426-SM-5GID8 60-69 years, male 151.5
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 25.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 25.6
FF:10024-101D6 15,40,85 years, mixed 25.6

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