HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:64.6 nTPM
HPA:64.6 nTPM
GTEx:46.4 nTPM
FANTOM5:101.0 Scaled Tags Per Million
Pig:52.7 nTPM
Mouse:52.4 nTPM
Allen mouse:6.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052607
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.6
Sample id Sample description nTPM
Hippocampus
nTPM: 64.6
1911 Female, age 85, right hemisphere 67.3
2148 Female, age 91, left hemisphere 67.3
1855 Male, age 76, left hemisphere 66.2
2529 Female, age 94, left hemisphere 64.2
2621 Female, age 67, right hemisphere 63.1
1898 Male, age 80, left hemisphere 59.6
Dentate gyrus
nTPM: 60.5
2528 Male, age 74, both hemispheres 61.7
2531 Female, age 67, both hemispheres 61.5
2246 Female, age 85, both hemispheres 61.2
1927 Female, age 91, both hemispheres 59.9
2530 Female, age 94, left hemisphere 59.6
2010 Male, age 76, both hemispheres 59.2
Entorhinal gyrus
nTPM: 60.9
2117 Female, age 91, right hemisphere 65.6
2686 Male, age 75, right hemisphere 61.3
2764 Male, age 80, right hemisphere 61.0
1938 Female, age 85, left hemisphere 60.1
2613 Female, age 94, left hemisphere 58.9
1787 Male, age 76, left hemisphere 58.7
Hippocampus, CA1
nTPM: 61.7
2082 Female, age 91, right hemisphere 64.4
2749 Male, age 80, left hemisphere 64.3
2527 Male, age 74, both hemispheres 63.4
1873 Female, age 85, both hemispheres 62.6
2045 Male, age 76, both hemispheres 54.0
Hippocampus, CA2
nTPM: 61.7
1963 Male, age 80, left hemisphere 69.1
2113 Female, age 91, right hemisphere 65.1
2437 Female, age 94, left hemisphere 61.8
1940 Female, age 85, left hemisphere 61.5
2249 Male, age 74, both hemispheres 59.2
1892 Male, age 76, both hemispheres 53.5
Hippocampus, CA3
nTPM: 62.1
2861 Female, age 67, both hemispheres 69.0
1891 Female, age 85, both hemispheres 65.9
2137 Male, age 80, left hemisphere 64.7
2620 Female, age 94, left hemisphere 59.3
1867 Male, age 76, both hemispheres 57.5
2436 Male, age 74, both hemispheres 56.4
Parahippocampal cortex
nTPM: 58.4
2692 Male, age 74, both hemispheres 65.6
2245 Female, age 91, both hemispheres 60.6
2018 Male, age 76, both hemispheres 60.2
1990 Female, age 91, right hemisphere 58.4
2532 Female, age 72, left hemisphere 57.9
1933 Female, age 85, both hemispheres 57.2
2622 Female, age 67, right hemisphere 57.1
2693 Female, age 94, both hemispheres 56.3
2250 Female, age 67, right hemisphere 55.4
1850 Male, age 80, both hemispheres 55.1
Perirhinal gyrus
nTPM: 53.0
1841 Female, age 85, right hemisphere 54.4
2521 Female, age 94, right hemisphere 53.6
1794 Male, age 80, right hemisphere 53.3
1847 Female, age 91, left hemisphere 52.5
2848 Male, age 76, right hemisphere 51.1
Subiculum
nTPM: 63.3
2042 Male, age 76, both hemispheres 72.4
1901 Male, age 80, both hemispheres 66.2
2619 Male, age 74, both hemispheres 64.4
2729 Female, age 91, right hemisphere 63.4
1977 Female, age 85, both hemispheres 59.4
2438 Female, age 94, left hemisphere 54.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.4
Samples: 197

Max nTPM: 104.4
Min nTPM: 15.6
Std nTPM: 12.9
Median nTPM: 44.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 104.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 90.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 81.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 79.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 77.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 77.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 77.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 76.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 74.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 73.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 71.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.0
FF:10153-102I9 76 years, female 140.3
FF:10169-103B7 60 years, female 61.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 51.5
Samples: 4

Max nTPM: 54.5
Min nTPM: 46.4
Sample A Female 54.1
Sample B Female 54.5
Sample C Male 51.0
Sample D Male 46.4
Entorhinal cortex
nTPM: 46.0
Samples: 4

Max nTPM: 47.4
Min nTPM: 43.4
Sample A Female 47.4
Sample B Female 46.0
Sample C Male 47.2
Sample D Male 43.4
Subiculum
nTPM: 46.5
Samples: 4

Max nTPM: 51.4
Min nTPM: 43.9
Sample A Female 51.4
Sample B Female 46.4
Sample C Male 44.3
Sample D Male 43.9
Ventral hippocampus
nTPM: 52.7
Samples: 4

Max nTPM: 62.8
Min nTPM: 44.7
Sample A Female 44.7
Sample B Female 46.7
Sample C Male 56.5
Sample D Male 62.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.9
Samples: 4

Max nTPM: 46.6
Min nTPM: 41.4
Sample A Male 46.6
Sample B Male 41.4
Sample C Female 45.6
Sample D Female 41.9
Hippocampal formation
nTPM: 52.4
Samples: 4

Max nTPM: 54.7
Min nTPM: 50.0
Sample A Male 50.3
Sample B Male 54.7
Sample C Female 54.7
Sample D Female 50.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.2
68498986 Antisense, RP_050113_02_G04, Mouse strain C57BL/6J (56 days, male) 6.2

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