HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:71.0 nTPM
HPA:71.0 nTPM
GTEx:69.3 nTPM
FANTOM5:130.0 Scaled Tags Per Million
Pig:66.2 nTPM
Mouse:109.1 nTPM
Allen mouse:5.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB002589
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.0
Sample id Sample description nTPM
Hippocampus
nTPM: 63.2
1855 Male, age 76, left hemisphere 72.5
1898 Male, age 80, left hemisphere 69.1
2621 Female, age 67, right hemisphere 61.0
2148 Female, age 91, left hemisphere 60.2
1911 Female, age 85, right hemisphere 59.7
2529 Female, age 94, left hemisphere 56.7
Dentate gyrus
nTPM: 63.7
2010 Male, age 76, both hemispheres 69.5
2530 Female, age 94, left hemisphere 67.5
1927 Female, age 91, both hemispheres 64.3
2531 Female, age 67, both hemispheres 61.7
2246 Female, age 85, both hemispheres 61.4
2528 Male, age 74, both hemispheres 58.0
Entorhinal gyrus
nTPM: 63.9
1938 Female, age 85, left hemisphere 68.9
2613 Female, age 94, left hemisphere 66.8
2764 Male, age 80, right hemisphere 65.6
1787 Male, age 76, left hemisphere 63.6
2117 Female, age 91, right hemisphere 61.0
2686 Male, age 75, right hemisphere 57.8
Hippocampus, CA1
nTPM: 71.0
2749 Male, age 80, left hemisphere 88.7
2045 Male, age 76, both hemispheres 83.1
1873 Female, age 85, both hemispheres 62.4
2082 Female, age 91, right hemisphere 62.3
2527 Male, age 74, both hemispheres 58.8
Hippocampus, CA2
nTPM: 62.4
1892 Male, age 76, both hemispheres 73.0
1963 Male, age 80, left hemisphere 65.1
1940 Female, age 85, left hemisphere 61.3
2437 Female, age 94, left hemisphere 60.0
2113 Female, age 91, right hemisphere 58.9
2249 Male, age 74, both hemispheres 55.9
Hippocampus, CA3
nTPM: 66.9
2137 Male, age 80, left hemisphere 87.3
1867 Male, age 76, both hemispheres 70.0
2620 Female, age 94, left hemisphere 66.1
2861 Female, age 67, both hemispheres 64.8
1891 Female, age 85, both hemispheres 57.6
2436 Male, age 74, both hemispheres 55.3
Parahippocampal cortex
nTPM: 61.8
1933 Female, age 85, both hemispheres 66.4
2018 Male, age 76, both hemispheres 65.5
2245 Female, age 91, both hemispheres 63.6
2250 Female, age 67, right hemisphere 63.4
1850 Male, age 80, both hemispheres 63.3
2693 Female, age 94, both hemispheres 62.6
1990 Female, age 91, right hemisphere 60.8
2532 Female, age 72, left hemisphere 59.0
2692 Male, age 74, both hemispheres 57.4
2622 Female, age 67, right hemisphere 56.1
Perirhinal gyrus
nTPM: 66.2
2521 Female, age 94, right hemisphere 68.7
1847 Female, age 91, left hemisphere 68.4
2848 Male, age 76, right hemisphere 65.4
1841 Female, age 85, right hemisphere 65.3
1794 Male, age 80, right hemisphere 63.3
Subiculum
nTPM: 61.7
1901 Male, age 80, both hemispheres 67.3
1977 Female, age 85, both hemispheres 65.8
2042 Male, age 76, both hemispheres 63.9
2729 Female, age 91, right hemisphere 61.4
2619 Male, age 74, both hemispheres 57.2
2438 Female, age 94, left hemisphere 54.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.3
Samples: 197

Max nTPM: 127.3
Min nTPM: 39.2
Std nTPM: 15.7
Median nTPM: 69.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 127.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 111.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 110.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 103.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 102.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 100.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 100.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 99.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 97.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 96.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 96.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 130.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 130.0
FF:10169-103B7 60 years, female 150.6
FF:10153-102I9 76 years, female 109.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 66.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 66.2
Samples: 4

Max nTPM: 84.2
Min nTPM: 54.0
Sample A Female 84.2
Sample B Female 67.7
Sample C Male 58.9
Sample D Male 54.0
Entorhinal cortex
nTPM: 52.1
Samples: 4

Max nTPM: 53.7
Min nTPM: 48.6
Sample A Female 53.7
Sample B Female 53.4
Sample C Male 52.8
Sample D Male 48.6
Subiculum
nTPM: 52.9
Samples: 4

Max nTPM: 72.0
Min nTPM: 43.3
Sample A Female 72.0
Sample B Female 48.5
Sample C Male 47.7
Sample D Male 43.3
Ventral hippocampus
nTPM: 61.9
Samples: 4

Max nTPM: 70.2
Min nTPM: 46.0
Sample A Female 63.1
Sample B Female 46.0
Sample C Male 70.2
Sample D Male 68.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 109.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.3
Samples: 4

Max nTPM: 102.8
Min nTPM: 93.9
Sample A Male 100.9
Sample B Male 93.9
Sample C Female 102.8
Sample D Female 95.7
Hippocampal formation
nTPM: 109.1
Samples: 4

Max nTPM: 118.4
Min nTPM: 92.5
Sample A Male 112.5
Sample B Male 113.1
Sample C Female 118.4
Sample D Female 92.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.5
69734584 Antisense, RP_050503_01_C02, Mouse strain C57BL/6J (56 days, male) 5.5

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