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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:155.7 nTPM
FANTOM5:588.3 Scaled Tags Per Million
Pig:166.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA002242Antibody CAB001513Antibody CAB019952
Glial cells Not detectedLowMedium
Neuronal cells LowLowMedium







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 155.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 155.7
Samples: 246

Max nTPM: 425.2
Min nTPM: 67.6
Std nTPM: 50.9
Median nTPM: 142.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 425.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 371.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 361.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 320.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 310.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 308.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 297.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 292.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 283.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 278.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 277.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 272.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 266.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 254.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 253.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 244.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 244.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 243.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 240.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 239.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 234.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 230.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 226.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 218.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 216.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 216.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 213.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 210.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 209.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 208.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 204.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 203.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 196.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 195.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 195.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 195.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 194.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 194.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 187.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 186.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 185.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 185.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 185.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 182.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 178.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 178.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 177.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 176.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 175.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 175.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 174.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 174.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 173.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 172.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 172.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 172.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 171.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 171.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 171.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 170.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 170.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 170.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 169.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 168.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 168.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 167.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 166.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 165.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 165.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 165.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 165.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 165.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 164.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 164.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 164.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 164.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 161.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 161.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 161.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 160.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 160.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 159.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 158.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 158.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 158.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 157.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 157.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 156.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 155.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 155.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 154.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 154.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 154.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 153.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 153.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 152.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 152.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 151.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 151.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 151.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 151.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 151.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 150.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 149.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 149.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 149.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 147.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 147.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 147.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 147.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 146.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 146.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 146.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 145.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 145.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 145.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 144.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 143.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 143.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 143.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 142.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 142.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 142.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 142.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 141.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 141.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 141.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 140.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 140.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 140.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 140.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 140.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 140.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 140.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 139.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 139.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 138.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 138.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 138.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 138.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 138.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 138.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 136.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 136.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 136.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 136.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 136.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 135.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 135.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 134.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 134.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 134.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 134.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 134.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 133.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 133.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 133.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 132.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 132.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 132.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 132.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 132.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 132.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 132.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 131.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 131.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 131.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 131.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 130.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 130.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 130.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 130.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 130.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 129.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 129.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 128.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 128.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 128.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 128.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 126.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 126.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 126.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 126.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 125.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 125.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 125.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 125.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 124.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 124.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 123.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 123.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 123.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 123.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 122.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 122.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 121.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 121.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 120.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 120.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 120.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 120.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 120.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 120.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 119.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 119.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 119.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 118.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 117.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 117.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 117.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 117.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 117.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 116.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 115.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 114.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 113.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 113.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 112.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 112.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 111.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 109.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 109.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 108.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 108.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 108.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 107.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 106.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 106.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 104.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 104.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 103.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 102.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 100.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 99.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 99.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 97.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 97.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 96.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 96.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 96.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 95.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 95.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 93.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 77.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 72.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 67.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 588.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 588.3
FF:10164-103B2 76 years, female 588.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 166.0
Pig sample Sample description nTPM
Caudate
nTPM: 166.0
Samples: 4

Max nTPM: 187.7
Min nTPM: 149.7
Sample A Female 149.7
Sample B Female 161.9
Sample C Male 187.7
Sample D Male 164.5

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