HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:45.2 nTPM
HPA:45.2 nTPM
GTEx:65.7 nTPM
FANTOM5:55.1 Scaled Tags Per Million
Pig:46.2 nTPM
Mouse:66.8 nTPM
Allen mouse:2.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041035
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.2
Sample id Sample description nTPM
Hippocampus
nTPM: 39.4
1898 Male, age 80, left hemisphere 46.1
2621 Female, age 67, right hemisphere 42.6
1855 Male, age 76, left hemisphere 41.9
1911 Female, age 85, right hemisphere 39.2
2148 Female, age 91, left hemisphere 36.7
2529 Female, age 94, left hemisphere 29.9
Dentate gyrus
nTPM: 45.2
2530 Female, age 94, left hemisphere 75.2
2010 Male, age 76, both hemispheres 46.7
1927 Female, age 91, both hemispheres 40.7
2246 Female, age 85, both hemispheres 38.4
2528 Male, age 74, both hemispheres 38.4
2531 Female, age 67, both hemispheres 31.9
Entorhinal gyrus
nTPM: 42.3
2764 Male, age 80, right hemisphere 52.0
2117 Female, age 91, right hemisphere 50.5
2613 Female, age 94, left hemisphere 49.2
1787 Male, age 76, left hemisphere 40.6
1938 Female, age 85, left hemisphere 38.2
2686 Male, age 75, right hemisphere 23.1
Hippocampus, CA1
nTPM: 41.6
2749 Male, age 80, left hemisphere 77.8
1873 Female, age 85, both hemispheres 41.8
2527 Male, age 74, both hemispheres 36.3
2082 Female, age 91, right hemisphere 28.1
2045 Male, age 76, both hemispheres 24.2
Hippocampus, CA2
nTPM: 43.7
1963 Male, age 80, left hemisphere 63.5
2437 Female, age 94, left hemisphere 46.8
1892 Male, age 76, both hemispheres 44.5
2249 Male, age 74, both hemispheres 44.2
1940 Female, age 85, left hemisphere 33.6
2113 Female, age 91, right hemisphere 29.6
Hippocampus, CA3
nTPM: 36.1
2137 Male, age 80, left hemisphere 54.0
1867 Male, age 76, both hemispheres 38.0
2620 Female, age 94, left hemisphere 35.6
1891 Female, age 85, both hemispheres 33.0
2861 Female, age 67, both hemispheres 31.4
2436 Male, age 74, both hemispheres 24.6
Parahippocampal cortex
nTPM: 32.9
2532 Female, age 72, left hemisphere 43.2
2245 Female, age 91, both hemispheres 37.7
1990 Female, age 91, right hemisphere 37.4
2692 Male, age 74, both hemispheres 37.0
1933 Female, age 85, both hemispheres 33.8
1850 Male, age 80, both hemispheres 30.3
2693 Female, age 94, both hemispheres 29.6
2250 Female, age 67, right hemisphere 28.2
2018 Male, age 76, both hemispheres 27.4
2622 Female, age 67, right hemisphere 24.9
Perirhinal gyrus
nTPM: 32.3
2521 Female, age 94, right hemisphere 43.0
1794 Male, age 80, right hemisphere 35.7
1847 Female, age 91, left hemisphere 29.8
1841 Female, age 85, right hemisphere 27.8
2848 Male, age 76, right hemisphere 25.3
Subiculum
nTPM: 42.1
1901 Male, age 80, both hemispheres 52.8
2042 Male, age 76, both hemispheres 49.6
1977 Female, age 85, both hemispheres 47.4
2438 Female, age 94, left hemisphere 40.0
2619 Male, age 74, both hemispheres 35.7
2729 Female, age 91, right hemisphere 27.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.7
Samples: 197

Max nTPM: 189.9
Min nTPM: 4.2
Std nTPM: 32.0
Median nTPM: 61.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 189.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 156.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 137.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 134.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 131.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 131.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 131.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 129.8
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 124.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 122.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 121.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.1
FF:10169-103B7 60 years, female 71.1
FF:10153-102I9 76 years, female 39.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.2
Samples: 4

Max nTPM: 78.3
Min nTPM: 22.6
Sample A Female 78.3
Sample B Female 46.0
Sample C Male 38.0
Sample D Male 22.6
Entorhinal cortex
nTPM: 31.1
Samples: 4

Max nTPM: 34.4
Min nTPM: 27.8
Sample A Female 33.5
Sample B Female 28.7
Sample C Male 34.4
Sample D Male 27.8
Subiculum
nTPM: 30.2
Samples: 4

Max nTPM: 47.0
Min nTPM: 23.6
Sample A Female 47.0
Sample B Female 25.7
Sample C Male 24.3
Sample D Male 23.6
Ventral hippocampus
nTPM: 35.7
Samples: 4

Max nTPM: 45.5
Min nTPM: 19.8
Sample A Female 45.5
Sample B Female 19.8
Sample C Male 36.2
Sample D Male 41.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.8
Samples: 4

Max nTPM: 72.6
Min nTPM: 55.7
Sample A Male 68.5
Sample B Male 72.6
Sample C Female 55.7
Sample D Female 70.5
Hippocampal formation
nTPM: 65.9
Samples: 4

Max nTPM: 76.2
Min nTPM: 52.3
Sample A Male 52.3
Sample B Male 67.9
Sample C Female 76.2
Sample D Female 67.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.5
69527722 Antisense, RP_050421_02_C04, Mouse strain C57BL/6J (56 days, male) 2.5

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