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RPS17
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  • RPS17
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:683.6 nTPM
FANTOM5:46.0 Scaled Tags Per Million
Pig:63.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA055060
Glial cells High
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 683.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 683.6
Samples: 246

Max nTPM: 1698.4
Min nTPM: 217.7
Std nTPM: 201.0
Median nTPM: 652.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1698.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1531.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1465.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1251.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1230.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1214.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1173.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1161.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1155.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1104.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1085.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1082.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1063.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1051.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1043.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1018.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1005.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 998.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 992.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 974.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 923.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 918.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 915.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 908.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 903.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 894.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 894.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 889.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 885.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 884.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 883.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 881.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 879.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 867.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 866.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 866.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 851.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 844.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 843.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 836.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 829.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 829.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 828.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 823.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 817.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 816.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 812.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 806.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 805.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 799.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 798.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 793.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 793.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 793.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 793.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 791.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 786.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 783.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 779.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 778.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 777.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 775.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 775.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 772.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 769.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 768.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 767.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 766.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 766.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 765.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 759.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 759.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 756.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 754.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 752.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 752.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 748.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 742.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 737.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 736.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 730.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 726.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 726.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 726.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 724.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 719.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 719.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 719.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 718.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 714.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 712.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 712.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 707.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 704.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 703.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 702.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 701.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 700.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 699.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 694.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 692.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 686.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 684.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 683.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 682.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 680.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 680.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 677.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 676.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 675.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 675.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 673.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 672.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 670.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 670.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 669.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 668.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 663.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 657.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 657.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 657.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 655.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 654.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 650.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 650.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 650.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 649.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 649.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 646.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 644.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 642.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 641.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 640.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 640.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 638.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 637.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 631.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 627.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 621.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 619.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 616.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 616.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 616.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 614.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 613.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 613.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 613.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 611.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 609.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 608.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 607.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 605.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 603.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 601.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 601.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 600.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 600.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 599.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 599.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 596.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 594.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 592.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 591.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 591.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 590.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 584.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 581.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 577.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 576.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 576.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 574.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 572.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 570.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 569.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 569.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 569.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 566.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 563.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 561.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 560.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 559.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 558.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 555.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 553.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 552.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 552.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 550.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 548.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 539.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 537.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 537.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 535.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 535.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 531.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 530.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 527.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 527.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 525.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 524.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 524.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 524.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 513.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 512.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 511.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 510.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 508.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 502.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 498.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 497.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 494.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 491.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 491.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 488.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 481.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 480.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 479.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 477.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 475.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 472.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 465.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 463.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 462.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 458.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 456.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 453.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 452.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 447.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 444.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 441.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 441.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 440.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 438.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 431.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 430.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 430.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 429.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 427.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 418.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 417.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 411.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 402.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 399.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 399.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 392.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 377.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 217.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 46.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 46.0
FF:10164-103B2 76 years, female 46.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 63.7
Pig sample Sample description nTPM
Caudate
nTPM: 63.7
Samples: 4

Max nTPM: 69.9
Min nTPM: 54.0
Sample A Female 63.7
Sample B Female 69.9
Sample C Male 67.3
Sample D Male 54.0

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