HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:172.7 nTPM
HPA:172.7 nTPM
GTEx:215.7 nTPM
FANTOM5:47.8 Scaled Tags Per Million
Pig:59.4 nTPM
Mouse:102.8 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042664
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 172.7
Sample id Sample description nTPM
Hippocampus
nTPM: 162.1
2529 Female, age 94, left hemisphere 165.4
1898 Male, age 80, left hemisphere 164.3
1911 Female, age 85, right hemisphere 162.1
2621 Female, age 67, right hemisphere 162.1
1855 Male, age 76, left hemisphere 160.3
2148 Female, age 91, left hemisphere 158.5
Dentate gyrus
nTPM: 165.3
2531 Female, age 67, both hemispheres 177.2
2530 Female, age 94, left hemisphere 169.3
1927 Female, age 91, both hemispheres 165.7
2010 Male, age 76, both hemispheres 162.7
2246 Female, age 85, both hemispheres 160.0
2528 Male, age 74, both hemispheres 157.1
Entorhinal gyrus
nTPM: 156.1
2764 Male, age 80, right hemisphere 165.3
2613 Female, age 94, left hemisphere 164.7
1938 Female, age 85, left hemisphere 162.3
1787 Male, age 76, left hemisphere 159.0
2686 Male, age 75, right hemisphere 144.8
2117 Female, age 91, right hemisphere 140.7
Hippocampus, CA1
nTPM: 163.9
2045 Male, age 76, both hemispheres 186.5
2749 Male, age 80, left hemisphere 184.6
1873 Female, age 85, both hemispheres 158.4
2527 Male, age 74, both hemispheres 149.1
2082 Female, age 91, right hemisphere 141.0
Hippocampus, CA2
nTPM: 156.9
1892 Male, age 76, both hemispheres 177.6
1963 Male, age 80, left hemisphere 170.6
2437 Female, age 94, left hemisphere 157.8
1940 Female, age 85, left hemisphere 150.8
2249 Male, age 74, both hemispheres 143.7
2113 Female, age 91, right hemisphere 141.0
Hippocampus, CA3
nTPM: 172.7
2620 Female, age 94, left hemisphere 195.7
2137 Male, age 80, left hemisphere 190.7
1867 Male, age 76, both hemispheres 179.9
2861 Female, age 67, both hemispheres 177.5
1891 Female, age 85, both hemispheres 150.8
2436 Male, age 74, both hemispheres 141.8
Parahippocampal cortex
nTPM: 153.4
2245 Female, age 91, both hemispheres 166.7
2532 Female, age 72, left hemisphere 161.7
2018 Male, age 76, both hemispheres 161.2
1933 Female, age 85, both hemispheres 159.3
1850 Male, age 80, both hemispheres 154.4
2622 Female, age 67, right hemisphere 153.8
2250 Female, age 67, right hemisphere 150.3
2693 Female, age 94, both hemispheres 147.0
1990 Female, age 91, right hemisphere 140.3
2692 Male, age 74, both hemispheres 139.7
Perirhinal gyrus
nTPM: 166.4
2521 Female, age 94, right hemisphere 175.4
1794 Male, age 80, right hemisphere 173.5
1841 Female, age 85, right hemisphere 169.9
2848 Male, age 76, right hemisphere 162.8
1847 Female, age 91, left hemisphere 150.6
Subiculum
nTPM: 150.2
1977 Female, age 85, both hemispheres 157.8
1901 Male, age 80, both hemispheres 153.4
2042 Male, age 76, both hemispheres 152.6
2619 Male, age 74, both hemispheres 150.1
2438 Female, age 94, left hemisphere 144.4
2729 Female, age 91, right hemisphere 142.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 215.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 215.7
Samples: 197

Max nTPM: 473.1
Min nTPM: 83.4
Std nTPM: 82.6
Median nTPM: 203.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 473.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 471.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 433.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 432.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 431.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 430.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 413.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 404.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 392.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 389.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 377.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.8
FF:10153-102I9 76 years, female 50.6
FF:10169-103B7 60 years, female 44.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.5
Samples: 4

Max nTPM: 51.5
Min nTPM: 31.5
Sample A Female 51.5
Sample B Female 40.0
Sample C Male 51.0
Sample D Male 31.5
Entorhinal cortex
nTPM: 59.5
Samples: 4

Max nTPM: 67.0
Min nTPM: 48.6
Sample A Female 62.8
Sample B Female 48.6
Sample C Male 67.0
Sample D Male 59.4
Subiculum
nTPM: 50.0
Samples: 4

Max nTPM: 71.9
Min nTPM: 36.0
Sample A Female 71.9
Sample B Female 36.0
Sample C Male 42.5
Sample D Male 49.4
Ventral hippocampus
nTPM: 39.0
Samples: 4

Max nTPM: 55.1
Min nTPM: 31.4
Sample A Female 35.9
Sample B Female 31.4
Sample C Male 55.1
Sample D Male 33.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 102.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 102.8
Samples: 4

Max nTPM: 111.6
Min nTPM: 93.2
Sample A Male 105.3
Sample B Male 111.6
Sample C Female 93.2
Sample D Female 101.2
Hippocampal formation
nTPM: 71.5
Samples: 4

Max nTPM: 86.0
Min nTPM: 60.3
Sample A Male 78.3
Sample B Male 60.3
Sample C Female 61.3
Sample D Female 86.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
70612727 Antisense, RP_050725_01_C05, Mouse strain C57BL/6J (56 days, male) 3.7
75695661 Antisense, RP_060518_04_C12, Mouse strain C57BL/6J (56 days, male) 0.9

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