HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:209.1 nTPM
HPA:209.1 nTPM
GTEx:254.1 nTPM
FANTOM5:198.8 Scaled Tags Per Million
Pig:146.8 nTPM
Mouse:97.6 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003281Antibody CAB011204
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 209.1
Sample id Sample description nTPM
Hippocampus
nTPM: 192.1
2529 Female, age 94, left hemisphere 207.6
2621 Female, age 67, right hemisphere 201.2
1911 Female, age 85, right hemisphere 199.9
1898 Male, age 80, left hemisphere 189.7
1855 Male, age 76, left hemisphere 182.1
2148 Female, age 91, left hemisphere 171.9
Dentate gyrus
nTPM: 198.0
2530 Female, age 94, left hemisphere 269.0
2010 Male, age 76, both hemispheres 207.7
2531 Female, age 67, both hemispheres 191.5
2246 Female, age 85, both hemispheres 187.6
1927 Female, age 91, both hemispheres 170.2
2528 Male, age 74, both hemispheres 161.9
Entorhinal gyrus
nTPM: 196.8
2686 Male, age 75, right hemisphere 224.0
2117 Female, age 91, right hemisphere 223.7
1938 Female, age 85, left hemisphere 197.5
1787 Male, age 76, left hemisphere 181.8
2613 Female, age 94, left hemisphere 180.2
2764 Male, age 80, right hemisphere 173.9
Hippocampus, CA1
nTPM: 180.2
2749 Male, age 80, left hemisphere 187.9
1873 Female, age 85, both hemispheres 180.7
2527 Male, age 74, both hemispheres 179.5
2082 Female, age 91, right hemisphere 178.0
2045 Male, age 76, both hemispheres 175.0
Hippocampus, CA2
nTPM: 188.9
1963 Male, age 80, left hemisphere 225.5
2437 Female, age 94, left hemisphere 186.2
2113 Female, age 91, right hemisphere 184.1
1892 Male, age 76, both hemispheres 179.5
2249 Male, age 74, both hemispheres 179.4
1940 Female, age 85, left hemisphere 178.5
Hippocampus, CA3
nTPM: 175.6
1891 Female, age 85, both hemispheres 205.8
2137 Male, age 80, left hemisphere 192.9
1867 Male, age 76, both hemispheres 192.8
2861 Female, age 67, both hemispheres 165.9
2436 Male, age 74, both hemispheres 150.8
2620 Female, age 94, left hemisphere 145.4
Parahippocampal cortex
nTPM: 190.7
2532 Female, age 72, left hemisphere 219.7
2692 Male, age 74, both hemispheres 210.4
2018 Male, age 76, both hemispheres 200.5
2245 Female, age 91, both hemispheres 192.0
1933 Female, age 85, both hemispheres 188.2
1850 Male, age 80, both hemispheres 187.9
1990 Female, age 91, right hemisphere 187.3
2622 Female, age 67, right hemisphere 184.4
2250 Female, age 67, right hemisphere 170.3
2693 Female, age 94, both hemispheres 166.8
Perirhinal gyrus
nTPM: 172.8
2848 Male, age 76, right hemisphere 190.0
1841 Female, age 85, right hemisphere 175.9
1794 Male, age 80, right hemisphere 171.1
2521 Female, age 94, right hemisphere 163.5
1847 Female, age 91, left hemisphere 163.4
Subiculum
nTPM: 209.1
2042 Male, age 76, both hemispheres 248.3
2438 Female, age 94, left hemisphere 236.3
1901 Male, age 80, both hemispheres 216.4
1977 Female, age 85, both hemispheres 202.8
2729 Female, age 91, right hemisphere 184.7
2619 Male, age 74, both hemispheres 166.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 254.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 254.1
Samples: 197

Max nTPM: 847.4
Min nTPM: 62.2
Std nTPM: 134.1
Median nTPM: 217.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 847.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 829.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 746.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 707.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 687.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 650.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 637.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 621.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 519.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 473.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 471.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 198.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 198.8
FF:10153-102I9 76 years, female 216.6
FF:10169-103B7 60 years, female 181.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 146.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 146.8
Samples: 4

Max nTPM: 201.2
Min nTPM: 92.2
Sample A Female 201.2
Sample B Female 134.4
Sample C Male 159.2
Sample D Male 92.2
Entorhinal cortex
nTPM: 120.7
Samples: 4

Max nTPM: 134.0
Min nTPM: 110.1
Sample A Female 134.0
Sample B Female 110.1
Sample C Male 119.2
Sample D Male 119.4
Subiculum
nTPM: 120.3
Samples: 4

Max nTPM: 145.9
Min nTPM: 105.6
Sample A Female 145.9
Sample B Female 119.7
Sample C Male 105.6
Sample D Male 110.1
Ventral hippocampus
nTPM: 127.5
Samples: 4

Max nTPM: 184.5
Min nTPM: 99.4
Sample A Female 184.5
Sample B Female 99.4
Sample C Male 118.3
Sample D Male 107.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 85.0
Samples: 4

Max nTPM: 86.6
Min nTPM: 82.6
Sample A Male 86.5
Sample B Male 82.6
Sample C Female 86.6
Sample D Female 84.3
Hippocampal formation
nTPM: 97.6
Samples: 4

Max nTPM: 105.0
Min nTPM: 88.2
Sample A Male 100.3
Sample B Male 96.9
Sample C Female 105.0
Sample D Female 88.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
71280538 Antisense, RP_050818_01_A11, Mouse strain C57BL/6J (56 days, male) 2.4
77799059 Antisense, RP_070212_03_E04, Mouse strain C57BL/6J (56 days, male) 1.1
70813353 Antisense, RP_050712_03_G08, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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