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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:645.1 nTPM
FANTOM5:1667.8 Scaled Tags Per Million
Pig:921.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041264Antibody HPA041271
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 645.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 645.1
Samples: 246

Max nTPM: 1446.5
Min nTPM: 321.9
Std nTPM: 170.5
Median nTPM: 612.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1446.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1300.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1188.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1077.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1047.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1033.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1016.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1004.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1002.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 956.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 948.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 942.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 938.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 911.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 911.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 910.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 903.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 903.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 897.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 891.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 891.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 881.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 873.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 868.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 868.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 865.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 864.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 859.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 857.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 855.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 846.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 837.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 836.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 834.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 831.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 830.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 816.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 815.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 809.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 809.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 804.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 803.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 800.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 798.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 793.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 793.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 791.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 786.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 779.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 778.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 774.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 773.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 771.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 768.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 763.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 759.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 756.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 755.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 754.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 752.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 751.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 749.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 747.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 746.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 741.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 739.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 737.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 732.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 729.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 729.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 729.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 725.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 724.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 718.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 717.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 713.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 712.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 709.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 709.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 703.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 697.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 696.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 694.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 694.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 692.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 687.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 687.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 685.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 683.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 682.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 677.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 672.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 671.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 671.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 669.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 665.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 665.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 664.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 661.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 661.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 659.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 659.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 657.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 651.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 648.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 647.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 647.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 647.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 646.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 642.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 642.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 639.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 629.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 628.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 626.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 625.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 624.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 623.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 620.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 620.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 618.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 615.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 612.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 612.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 610.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 608.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 607.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 607.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 606.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 606.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 605.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 602.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 600.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 599.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 599.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 598.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 596.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 596.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 595.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 591.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 590.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 589.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 587.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 585.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 584.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 583.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 583.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 581.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 580.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 578.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 577.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 576.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 574.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 574.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 573.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 571.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 567.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 564.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 564.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 563.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 563.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 561.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 559.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 556.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 555.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 554.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 550.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 550.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 548.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 547.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 546.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 544.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 538.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 535.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 532.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 532.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 532.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 531.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 529.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 529.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 527.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 527.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 526.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 525.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 524.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 523.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 520.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 519.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 519.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 519.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 516.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 516.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 507.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 502.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 501.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 501.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 498.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 496.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 494.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 493.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 492.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 490.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 489.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 485.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 484.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 483.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 480.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 478.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 477.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 474.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 468.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 467.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 463.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 463.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 462.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 462.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 459.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 458.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 458.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 457.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 457.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 456.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 450.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 446.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 442.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 437.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 436.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 434.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 433.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 432.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 429.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 429.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 420.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 414.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 411.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 402.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 402.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 399.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 399.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 393.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 389.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 385.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 382.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 371.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 368.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 321.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1667.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1667.8
FF:10164-103B2 76 years, female 1667.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 921.1
Pig sample Sample description nTPM
Caudate
nTPM: 921.1
Samples: 4

Max nTPM: 1099.4
Min nTPM: 790.4
Sample A Female 841.4
Sample B Female 953.0
Sample C Male 1099.4
Sample D Male 790.4

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