We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TCEAL2
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • TCEAL2
TISSUE AMYGDALA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Tissue proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:115.4 nTPM
HPA:115.4 nTPM
GTEx:192.4 nTPM
FANTOM5:93.2 Scaled Tags Per Million

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 115.4
Sample id Sample description nTPM
Amygdala
nTPM: 103.7
2514 Male, age 75, right hemisphere 106.6
2814 Male, age 76, right hemisphere 105.4
2695 Female, age 67, right hemisphere 102.8
2517 Female, age 94, left hemisphere 102.3
1987 Female, age 91, left hemisphere 101.4
Basal amygdala
nTPM: 107.0
2243 Female, age 91, right hemisphere 115.8
2685 Female, age 94, left hemisphere 110.5
2827 Female, age 67, right hemisphere 106.1
1955 Male, age 76, both hemispheres 105.1
2609 Male, age 75, right hemisphere 103.1
2110 Male, age 80, left hemisphere 101.4
Central amygdala
nTPM: 106.7
2701 Female, age 91, right hemisphere 117.8
2239 Male, age 80, left hemisphere 113.1
1905 Male, age 76, both hemispheres 103.4
2515 Male, age 75, right hemisphere 101.7
2826 Female, age 94, left hemisphere 97.5
Corticomedial amygdala
nTPM: 112.1
2535 Female, age 67, right hemisphere 125.4
2242 Female, age 91, right hemisphere 116.9
2240 Male, age 76, both hemispheres 116.1
2429 Female, age 94, left hemisphere 109.3
2829 Male, age 80, left hemisphere 107.3
2428 Male, age 75, right hemisphere 97.6
Lateral amygdala
nTPM: 103.0
2255 Female, age 91, right hemisphere 111.2
1883 Male, age 76, both hemispheres 106.3
2256 Male, age 80, left hemisphere 104.7
2534 Female, age 94, left hemisphere 103.7
2516 Male, age 75, right hemisphere 99.5
2830 Female, age 67, right hemisphere 92.6
Stria terminalis, bed nucleus
nTPM: 115.4
2486 Female, age 94, both hemispheres 117.5
2201 Male, age 74, unknown 115.4
1974 Female, age 91, both hemispheres 113.3

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 192.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 192.4
Samples: 152

Max nTPM: 409.1
Min nTPM: 29.4
Std nTPM: 57.2
Median nTPM: 183.8
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 409.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 384.5
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 351.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 336.5
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 327.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 319.5
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 287.7
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 285.2
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 281.3
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 280.6
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 280.4
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 278.6
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 274.1
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 272.2
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 268.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 264.8
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 261.1
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 260.0
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 255.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 253.2
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 252.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 251.7
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 248.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 242.8
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 242.6
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 240.3
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 240.1
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 239.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 237.6
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 235.8
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 233.3
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 232.1
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 231.3
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 231.0
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 228.7
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 225.7
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 224.0
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 223.5
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 222.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 222.2
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 221.5
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 217.7
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 217.3
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 216.7
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 216.6
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 215.8
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 214.2
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 211.8
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 211.8
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 209.2
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 206.2
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 205.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 204.0
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 203.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 203.2
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 202.4
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 201.2
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 200.8
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 198.9
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 198.3
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 197.6
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 197.6
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 197.4
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 196.8
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 196.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 196.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 195.5
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 194.2
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 192.2
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 189.6
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 188.9
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 187.3
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 186.3
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 185.8
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 185.6
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 184.1
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 183.5
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 183.5
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 182.4
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 180.8
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 179.9
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 179.3
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 178.6
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 178.1
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 178.0
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 176.5
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 176.0
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 175.7
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 175.7
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 175.6
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 174.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 173.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 172.8
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 171.5
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 171.3
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 170.8
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 170.8
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 170.3
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 167.4
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 167.0
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 166.5
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 164.8
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 163.7
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 161.3
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 161.2
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 160.6
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 159.5
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 158.9
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 156.1
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 156.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 155.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 154.8
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 154.7
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 154.7
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 154.4
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 154.3
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 154.0
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 153.9
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 153.8
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 153.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 152.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 152.1
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 151.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 148.1
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 147.8
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 147.6
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 144.0
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 143.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 143.0
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 141.1
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 139.6
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 137.9
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 136.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 135.0
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 134.8
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 133.1
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 130.8
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 128.3
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 126.9
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 124.8
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 121.8
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 119.8
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 118.3
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 117.4
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 116.4
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 115.2
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 114.7
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 112.6
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 85.3
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 83.0
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 69.0
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 29.4
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 93.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 93.2
FF:10151-102I7 76 years, female 93.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.