COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:48.6 nTPM
HPA:5.1 nTPM
GTEx:48.6 nTPM
FANTOM5:16.2 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 5.1
overview
Male, age 54 		Colon sample 67
nTPM: 4.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 1.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 0.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 3.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 16.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 1.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 1.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 11.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 9.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 48.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 48.6
Samples: 373

Max nTPM: 100.8
Min nTPM: 0.6
Std nTPM: 16.9
Median nTPM: 48.6
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 100.8
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 96.6
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 92.4
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 91.4
GTEX-13RTJ-1926-SM-5YYA2 60-69 years, male 87.3
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 87.2
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 87.1
GTEX-WXYG-1726-SM-4ONCU 50-59 years, female 85.5
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 84.2
GTEX-14PK6-1826-SM-69LOM 70-79 years, female 80.6
GTEX-1LG7Y-2226-SM-E9U5K 50-59 years, male 80.6
Show allShow less
Colon - Transverse
Average nTPM: 22.8
Samples: 406

Max nTPM: 103.1
Min nTPM: 0.0
Std nTPM: 21.8
Median nTPM: 17.3
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 103.1
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 88.8
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 82.4
GTEX-1GL5R-2426-SM-7MXV1 50-59 years, male 80.5
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 79.8
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 79.7
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 78.8
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 76.6
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 73.1
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 72.8
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 72.7
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 16.2
FF:10014-101C5 62,83,84 years, mixed 16.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.