HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:50.5 nTPM
HPA:50.5 nTPM
GTEx:58.1 nTPM
FANTOM5:118.9 Scaled Tags Per Million
Mouse:39.9 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.5
Sample id Sample description nTPM
Hippocampus
nTPM: 30.1
1898 Male, age 80, left hemisphere 41.1
1855 Male, age 76, left hemisphere 31.6
2621 Female, age 67, right hemisphere 31.2
2148 Female, age 91, left hemisphere 28.0
1911 Female, age 85, right hemisphere 25.1
2529 Female, age 94, left hemisphere 23.8
Dentate gyrus
nTPM: 32.3
1927 Female, age 91, both hemispheres 43.7
2528 Male, age 74, both hemispheres 37.0
2010 Male, age 76, both hemispheres 32.0
2246 Female, age 85, both hemispheres 30.1
2531 Female, age 67, both hemispheres 28.8
2530 Female, age 94, left hemisphere 22.4
Entorhinal gyrus
nTPM: 38.4
2764 Male, age 80, right hemisphere 46.6
1938 Female, age 85, left hemisphere 45.2
2613 Female, age 94, left hemisphere 44.1
1787 Male, age 76, left hemisphere 37.0
2686 Male, age 75, right hemisphere 31.1
2117 Female, age 91, right hemisphere 26.3
Hippocampus, CA1
nTPM: 32.9
1873 Female, age 85, both hemispheres 37.5
2749 Male, age 80, left hemisphere 35.5
2045 Male, age 76, both hemispheres 34.0
2527 Male, age 74, both hemispheres 32.9
2082 Female, age 91, right hemisphere 24.6
Hippocampus, CA2
nTPM: 32.3
1892 Male, age 76, both hemispheres 46.5
1963 Male, age 80, left hemisphere 36.5
2249 Male, age 74, both hemispheres 31.9
2437 Female, age 94, left hemisphere 30.1
2113 Female, age 91, right hemisphere 24.5
1940 Female, age 85, left hemisphere 24.1
Hippocampus, CA3
nTPM: 30.4
1867 Male, age 76, both hemispheres 36.1
2436 Male, age 74, both hemispheres 31.5
2620 Female, age 94, left hemisphere 31.1
1891 Female, age 85, both hemispheres 30.4
2137 Male, age 80, left hemisphere 27.9
2861 Female, age 67, both hemispheres 25.7
Parahippocampal cortex
nTPM: 41.6
1850 Male, age 80, both hemispheres 53.0
2250 Female, age 67, right hemisphere 49.3
1990 Female, age 91, right hemisphere 47.8
2693 Female, age 94, both hemispheres 46.2
2532 Female, age 72, left hemisphere 42.6
1933 Female, age 85, both hemispheres 42.1
2245 Female, age 91, both hemispheres 39.2
2622 Female, age 67, right hemisphere 32.8
2018 Male, age 76, both hemispheres 32.7
2692 Male, age 74, both hemispheres 29.9
Perirhinal gyrus
nTPM: 50.5
1847 Female, age 91, left hemisphere 57.2
1841 Female, age 85, right hemisphere 53.1
1794 Male, age 80, right hemisphere 49.5
2848 Male, age 76, right hemisphere 49.3
2521 Female, age 94, right hemisphere 43.6
Subiculum
nTPM: 29.4
1977 Female, age 85, both hemispheres 44.3
2619 Male, age 74, both hemispheres 32.4
1901 Male, age 80, both hemispheres 28.6
2438 Female, age 94, left hemisphere 27.2
2042 Male, age 76, both hemispheres 22.3
2729 Female, age 91, right hemisphere 21.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.1
Samples: 197

Max nTPM: 196.0
Min nTPM: 9.0
Std nTPM: 32.9
Median nTPM: 51.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 196.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 155.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 138.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 134.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 126.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 124.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 123.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 123.5
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 121.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 119.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 119.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 118.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 118.9
FF:10169-103B7 60 years, female 168.4
FF:10153-102I9 76 years, female 69.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.9
Samples: 4

Max nTPM: 40.8
Min nTPM: 39.0
Sample A Male 39.0
Sample B Male 40.3
Sample C Female 40.8
Sample D Female 39.5
Hippocampal formation
nTPM: 36.1
Samples: 4

Max nTPM: 40.0
Min nTPM: 32.6
Sample A Male 40.0
Sample B Male 36.9
Sample C Female 35.0
Sample D Female 32.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
583576 Antisense, RP_040831_02_G09, Mouse strain C57BL/6J (56 days, male) 4.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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