HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:830.5 nTPM
HPA:830.5 nTPM
GTEx:628.5 nTPM
FANTOM5:1141.6 Scaled Tags Per Million
Pig:509.4 nTPM
Mouse:1216.5 nTPM
Allen mouse:23.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004426Antibody CAB004647
Glial cells HighHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 830.5
Sample id Sample description nTPM
Hippocampus
nTPM: 778.6
1898 Male, age 80, left hemisphere 907.7
2529 Female, age 94, left hemisphere 781.2
2148 Female, age 91, left hemisphere 778.7
1855 Male, age 76, left hemisphere 746.1
2621 Female, age 67, right hemisphere 732.6
1911 Female, age 85, right hemisphere 725.3
Dentate gyrus
nTPM: 792.8
1927 Female, age 91, both hemispheres 867.4
2530 Female, age 94, left hemisphere 861.0
2528 Male, age 74, both hemispheres 832.9
2010 Male, age 76, both hemispheres 821.1
2246 Female, age 85, both hemispheres 733.5
2531 Female, age 67, both hemispheres 640.9
Entorhinal gyrus
nTPM: 765.6
2117 Female, age 91, right hemisphere 888.9
1938 Female, age 85, left hemisphere 822.5
2764 Male, age 80, right hemisphere 820.8
1787 Male, age 76, left hemisphere 775.8
2613 Female, age 94, left hemisphere 753.6
2686 Male, age 75, right hemisphere 532.1
Hippocampus, CA1
nTPM: 830.5
2749 Male, age 80, left hemisphere 954.7
2045 Male, age 76, both hemispheres 841.3
1873 Female, age 85, both hemispheres 827.7
2082 Female, age 91, right hemisphere 770.3
2527 Male, age 74, both hemispheres 758.3
Hippocampus, CA2
nTPM: 803.8
1963 Male, age 80, left hemisphere 843.7
2249 Male, age 74, both hemispheres 843.3
1892 Male, age 76, both hemispheres 832.3
1940 Female, age 85, left hemisphere 788.6
2113 Female, age 91, right hemisphere 762.2
2437 Female, age 94, left hemisphere 752.6
Hippocampus, CA3
nTPM: 772.1
2620 Female, age 94, left hemisphere 871.9
2137 Male, age 80, left hemisphere 833.0
2436 Male, age 74, both hemispheres 803.2
1867 Male, age 76, both hemispheres 789.5
1891 Female, age 85, both hemispheres 761.9
2861 Female, age 67, both hemispheres 572.9
Parahippocampal cortex
nTPM: 723.8
1850 Male, age 80, both hemispheres 865.0
1990 Female, age 91, right hemisphere 790.3
1933 Female, age 85, both hemispheres 766.5
2018 Male, age 76, both hemispheres 754.0
2250 Female, age 67, right hemisphere 747.7
2245 Female, age 91, both hemispheres 719.0
2532 Female, age 72, left hemisphere 696.0
2692 Male, age 74, both hemispheres 675.7
2693 Female, age 94, both hemispheres 662.6
2622 Female, age 67, right hemisphere 561.2
Perirhinal gyrus
nTPM: 814.9
1847 Female, age 91, left hemisphere 928.7
1794 Male, age 80, right hemisphere 907.0
1841 Female, age 85, right hemisphere 814.8
2521 Female, age 94, right hemisphere 714.8
2848 Male, age 76, right hemisphere 709.1
Subiculum
nTPM: 750.2
1901 Male, age 80, both hemispheres 807.8
2729 Female, age 91, right hemisphere 806.8
1977 Female, age 85, both hemispheres 764.4
2042 Male, age 76, both hemispheres 757.3
2619 Male, age 74, both hemispheres 736.4
2438 Female, age 94, left hemisphere 628.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 628.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 628.5
Samples: 197

Max nTPM: 1164.1
Min nTPM: 278.7
Std nTPM: 148.7
Median nTPM: 619.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 1164.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 1128.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 1125.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 1016.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 1004.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 991.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 971.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 941.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 940.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 910.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 906.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1141.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1141.6
FF:10169-103B7 60 years, female 1207.4
FF:10153-102I9 76 years, female 1075.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 509.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 509.5
Samples: 4

Max nTPM: 645.0
Min nTPM: 345.2
Sample A Female 645.0
Sample B Female 483.4
Sample C Male 564.2
Sample D Male 345.2
Entorhinal cortex
nTPM: 382.3
Samples: 4

Max nTPM: 436.4
Min nTPM: 300.8
Sample A Female 419.2
Sample B Female 372.8
Sample C Male 436.4
Sample D Male 300.8
Subiculum
nTPM: 440.6
Samples: 4

Max nTPM: 553.7
Min nTPM: 366.3
Sample A Female 553.7
Sample B Female 406.2
Sample C Male 436.3
Sample D Male 366.3
Ventral hippocampus
nTPM: 504.4
Samples: 4

Max nTPM: 693.3
Min nTPM: 345.0
Sample A Female 534.9
Sample B Female 345.0
Sample C Male 693.3
Sample D Male 444.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1216.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1216.5
Samples: 4

Max nTPM: 1343.8
Min nTPM: 1163.1
Sample A Male 1184.6
Sample B Male 1174.6
Sample C Female 1163.1
Sample D Female 1343.8
Hippocampal formation
nTPM: 1167.7
Samples: 4

Max nTPM: 1245.3
Min nTPM: 1091.3
Sample A Male 1091.3
Sample B Male 1119.6
Sample C Female 1214.6
Sample D Female 1245.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.1
70919346 Antisense, RP_050713_01_B06, Mouse strain C57BL/6J (56 days, male) 30.5
847 Antisense, RP_Baylor_102983, Mouse strain C57BL/6J (56 days, male) 15.6
846 Antisense, RP_Baylor_102983, Mouse strain C57BL/6J (56 days, male) 14.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.