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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:894.0 nTPM
FANTOM5:1194.3 Scaled Tags Per Million
Pig:404.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA004426Antibody CAB004647
Glial cells HighHigh
Neuronal cells HighHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 894.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 894.0
Samples: 246

Max nTPM: 1447.0
Min nTPM: 527.1
Std nTPM: 158.5
Median nTPM: 887.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1447.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1442.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1442.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1284.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1274.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1257.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1251.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1201.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1182.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1180.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1167.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1160.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1159.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1152.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1148.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1134.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1133.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1133.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1132.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1131.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1123.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1122.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1108.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1105.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1101.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1100.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1098.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1097.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1084.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1080.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1074.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 1070.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1061.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1059.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1048.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1043.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1042.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 1039.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1039.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1036.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1034.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1032.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1025.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1022.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1020.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1017.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1017.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1017.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1016.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1016.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1010.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1007.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1003.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1002.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 998.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 994.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 994.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 994.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 990.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 989.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 989.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 988.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 987.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 982.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 981.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 976.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 976.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 972.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 968.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 963.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 959.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 958.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 957.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 955.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 955.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 955.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 954.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 953.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 953.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 949.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 946.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 940.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 938.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 938.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 938.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 934.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 934.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 934.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 932.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 931.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 925.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 924.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 924.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 922.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 920.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 920.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 918.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 918.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 916.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 916.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 916.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 914.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 908.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 907.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 905.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 904.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 903.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 902.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 902.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 900.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 897.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 896.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 896.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 896.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 896.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 895.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 894.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 893.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 893.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 892.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 892.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 890.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 890.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 885.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 885.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 883.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 881.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 878.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 878.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 877.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 877.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 874.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 873.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 872.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 871.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 870.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 866.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 865.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 862.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 861.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 859.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 858.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 855.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 854.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 854.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 853.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 852.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 851.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 847.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 847.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 845.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 843.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 842.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 841.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 840.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 839.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 836.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 835.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 834.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 833.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 832.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 831.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 830.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 829.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 827.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 826.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 825.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 824.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 824.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 823.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 823.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 822.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 819.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 815.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 814.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 811.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 810.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 807.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 805.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 805.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 802.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 802.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 801.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 799.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 798.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 793.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 787.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 787.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 785.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 785.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 780.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 776.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 775.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 773.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 770.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 769.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 768.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 766.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 766.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 763.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 763.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 760.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 760.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 758.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 758.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 758.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 757.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 756.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 756.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 749.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 748.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 744.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 738.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 736.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 723.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 717.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 716.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 714.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 713.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 704.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 703.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 699.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 697.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 695.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 695.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 689.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 678.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 670.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 668.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 663.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 661.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 659.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 649.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 647.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 646.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 620.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 612.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 604.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 598.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 590.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 586.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 567.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 546.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 545.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 545.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 527.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1194.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1194.3
FF:10164-103B2 76 years, female 1194.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 404.9
Pig sample Sample description nTPM
Caudate
nTPM: 404.9
Samples: 4

Max nTPM: 496.5
Min nTPM: 351.3
Sample A Female 351.3
Sample B Female 408.6
Sample C Male 496.5
Sample D Male 363.1

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