HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:425.8 nTPM
HPA:425.8 nTPM
GTEx:242.7 nTPM
FANTOM5:37.3 Scaled Tags Per Million
Pig:39.1 nTPM
Mouse:33.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007575Antibody CAB002601Antibody CAB040549
Glial cells Not detectedLowLow
Neuronal cells LowMediumNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 425.8
Sample id Sample description nTPM
Hippocampus
nTPM: 425.8
1855 Male, age 76, left hemisphere 453.7
1898 Male, age 80, left hemisphere 444.0
2529 Female, age 94, left hemisphere 427.2
2148 Female, age 91, left hemisphere 416.5
2621 Female, age 67, right hemisphere 409.8
1911 Female, age 85, right hemisphere 403.6
Dentate gyrus
nTPM: 421.1
2010 Male, age 76, both hemispheres 450.4
2528 Male, age 74, both hemispheres 436.6
2530 Female, age 94, left hemisphere 426.6
2246 Female, age 85, both hemispheres 406.7
2531 Female, age 67, both hemispheres 405.3
1927 Female, age 91, both hemispheres 400.8
Entorhinal gyrus
nTPM: 405.2
2117 Female, age 91, right hemisphere 420.1
2764 Male, age 80, right hemisphere 408.9
1787 Male, age 76, left hemisphere 407.6
2686 Male, age 75, right hemisphere 407.4
1938 Female, age 85, left hemisphere 396.3
2613 Female, age 94, left hemisphere 390.8
Hippocampus, CA1
nTPM: 420.1
2045 Male, age 76, both hemispheres 449.9
2082 Female, age 91, right hemisphere 422.9
2527 Male, age 74, both hemispheres 413.7
1873 Female, age 85, both hemispheres 410.0
2749 Male, age 80, left hemisphere 404.1
Hippocampus, CA2
nTPM: 416.8
2249 Male, age 74, both hemispheres 434.1
1963 Male, age 80, left hemisphere 416.7
2113 Female, age 91, right hemisphere 416.2
2437 Female, age 94, left hemisphere 413.6
1940 Female, age 85, left hemisphere 413.4
1892 Male, age 76, both hemispheres 406.7
Hippocampus, CA3
nTPM: 413.7
2436 Male, age 74, both hemispheres 424.9
1867 Male, age 76, both hemispheres 419.8
2861 Female, age 67, both hemispheres 412.5
2137 Male, age 80, left hemisphere 411.2
1891 Female, age 85, both hemispheres 407.4
2620 Female, age 94, left hemisphere 406.2
Parahippocampal cortex
nTPM: 407.1
2018 Male, age 76, both hemispheres 450.6
1850 Male, age 80, both hemispheres 411.2
2250 Female, age 67, right hemisphere 410.0
1990 Female, age 91, right hemisphere 406.2
2245 Female, age 91, both hemispheres 404.3
1933 Female, age 85, both hemispheres 401.6
2622 Female, age 67, right hemisphere 398.4
2693 Female, age 94, both hemispheres 398.3
2532 Female, age 72, left hemisphere 397.0
2692 Male, age 74, both hemispheres 393.7
Perirhinal gyrus
nTPM: 409.9
2521 Female, age 94, right hemisphere 418.5
1847 Female, age 91, left hemisphere 411.6
1794 Male, age 80, right hemisphere 410.9
1841 Female, age 85, right hemisphere 408.5
2848 Male, age 76, right hemisphere 399.8
Subiculum
nTPM: 412.5
2042 Male, age 76, both hemispheres 438.8
2729 Female, age 91, right hemisphere 423.9
1901 Male, age 80, both hemispheres 412.1
1977 Female, age 85, both hemispheres 404.0
2619 Male, age 74, both hemispheres 402.1
2438 Female, age 94, left hemisphere 394.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 242.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 242.7
Samples: 197

Max nTPM: 1008.7
Min nTPM: 96.2
Std nTPM: 126.1
Median nTPM: 218.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 1008.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 888.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 877.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 656.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 648.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 633.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 596.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 522.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 498.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 495.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 453.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.3
FF:10153-102I9 76 years, female 40.1
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 39.2
Samples: 4

Max nTPM: 60.6
Min nTPM: 16.8
Sample A Female 60.6
Sample B Female 25.5
Sample C Male 53.7
Sample D Male 16.8
Entorhinal cortex
nTPM: 31.8
Samples: 4

Max nTPM: 45.4
Min nTPM: 16.6
Sample A Female 45.4
Sample B Female 26.0
Sample C Male 39.1
Sample D Male 16.6
Subiculum
nTPM: 35.3
Samples: 4

Max nTPM: 59.2
Min nTPM: 21.9
Sample A Female 59.2
Sample B Female 21.9
Sample C Male 29.9
Sample D Male 30.2
Ventral hippocampus
nTPM: 35.9
Samples: 4

Max nTPM: 47.4
Min nTPM: 24.6
Sample A Female 45.3
Sample B Female 26.1
Sample C Male 47.4
Sample D Male 24.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 34.8
Min nTPM: 28.8
Sample A Male 33.7
Sample B Male 34.8
Sample C Female 33.6
Sample D Female 28.8
Hippocampal formation
nTPM: 33.1
Samples: 4

Max nTPM: 36.0
Min nTPM: 29.9
Sample A Male 35.5
Sample B Male 29.9
Sample C Female 31.0
Sample D Female 36.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
77278967 Antisense, RP_070116_01_A03, Mouse strain C57BL/6J (56 days, male) 0.1
75695667 Antisense, RP_060518_04_D06, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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