We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
OGA
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • OGA
BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:66.8 nTPM
HPA:66.8 nTPM
FANTOM5:117.2 Scaled Tags Per Million
Pig:63.9 nTPM
Allen mouse:4.1 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 66.8
Sample id Sample description nTPM
Area postrema
nTPM: 61.1
2799 Male, age 61, both hemispheres 70.2
2054 Male, age 76, both hemispheres 59.8
2306 Male, age 80, both hemispheres 53.3
Cuneate nuclei
nTPM: 55.9
2376 Male, age 61, both hemispheres 58.6
2381 Male, age 80, both hemispheres 55.1
2131 Male, age 76, both hemispheres 54.1
Dorsal medullary reticular nucleus
nTPM: 58.3
2040 Female, age 85, both hemispheres 63.6
2373 Male, age 61, both hemispheres 57.5
2088 Male, age 76, both hemispheres 54.0
Dorsal motor vagal complex
nTPM: 60.6
2813 Female, age 72, unknown 69.3
2133 Female, age 91, both hemispheres 61.3
2643 Male, age 74, both hemispheres 61.1
2000 Male, age 74, unknown 61.0
2844 Male, age 55, unknown 59.7
2797 Male, age 61, both hemispheres 59.3
2185 Male, age 76, both hemispheres 56.9
2807 Female, age 85, both hemispheres 55.8
Gigantocellular reticular nuclei, medullary
nTPM: 60.4
1876 Female, age 85, both hemispheres 63.8
2314 Male, age 61, both hemispheres 62.8
2462 Male, age 74, both hemispheres 61.6
2022 Male, age 76, right hemisphere 59.4
2387 Female, age 91, both hemispheres 58.8
2310 Male, age 80, both hemispheres 56.0
Gigantocellular reticular nuclei, pars
nTPM: 60.9
2168 Male, age 76, both hemispheres 70.1
2084 Female, age 85, both hemispheres 62.2
2706 Male, age 80, both hemispheres 58.5
2330 Male, age 80, both hemispheres 57.5
2336 Male, age 61, both hemispheres 56.2
Inferior olive
nTPM: 59.5
2563 Male, age 74, both hemispheres 64.8
2178 Male, age 61, both hemispheres 60.7
2085 Female, age 85, both hemispheres 59.4
2628 Female, age 91, both hemispheres 58.1
2379 Male, age 80, both hemispheres 54.6
Lateral medullary reticular nucleus
nTPM: 62.0
2044 Male, age 76, both hemispheres 67.9
2804 Female, age 91, both hemispheres 64.9
2305 Male, age 74, both hemispheres 64.7
2374 Male, age 61, both hemispheres 64.3
2190 Female, age 85, both hemispheres 58.0
2852 Male, age 80, both hemispheres 52.4
Medial vestibular nucleus
nTPM: 62.5
2801 Male, age 74, both hemispheres 67.5
2803 Female, age 91, both hemispheres 65.0
2743 Female, age 85, both hemispheres 63.3
2134 Male, age 76, both hemispheres 63.0
2093 Male, age 80, both hemispheres 59.2
2624 Male, age 61, both hemispheres 57.3
Motor hypoglossal nucleus
nTPM: 59.2
2125 Female, age 91, both hemispheres 62.3
2461 Male, age 61, both hemispheres 62.2
2132 Female, age 85, both hemispheres 60.7
2182 Male, age 80, both hemispheres 55.7
2277 Male, age 76, both hemispheres 55.2
Nucleus ambiguus
nTPM: 54.0
2071 Male, age 76, both hemispheres 58.6
2096 Female, age 85, both hemispheres 49.4
Nucleus cuneatus
nTPM: 55.2
2564 Male, age 74, both hemispheres 59.2
2805 Female, age 91, both hemispheres 55.6
2100 Male, age 76, both hemispheres 55.5
2562 Male, age 61, both hemispheres 54.5
2380 Male, age 80, both hemispheres 54.1
2808 Female, age 85, both hemispheres 52.4
Nucleus gracilis
nTPM: 54.3
2627 Male, age 74, both hemispheres 62.0
2382 Male, age 80, both hemispheres 53.4
2299 Female, age 85, both hemispheres 47.3
Nucleus raphe magnus
nTPM: 66.8
2172 Female, age 85, both hemispheres 77.3
2160 Male, age 61, both hemispheres 71.4
2051 Male, age 76, both hemispheres 65.8
2455 Male, age 74, both hemispheres 65.4
2328 Male, age 80, both hemispheres 62.1
2459 Female, age 91, both hemispheres 58.8
Nucleus raphe obscurus
nTPM: 61.4
2800 Male, age 61, midline 64.4
2845 Female, age 85, midline 62.3
2142 Male, age 76, midline 57.7
Nucleus raphe pallidus
nTPM: 60.4
1924 Male, age 61, midline 66.3
2145 Male, age 76, midline 57.4
2183 Male, age 80, midline 57.4
Nucleus tractus solitarii
nTPM: 58.6
2144 Female, age 91, right hemisphere 76.4
2656 Male, age 76, both hemispheres 56.1
2191 Female, age 85, both hemispheres 51.0
2307 Male, age 80, both hemispheres 50.8
Parvicellular reticular nuclei
nTPM: 58.9
2095 Male, age 76, both hemispheres 64.0
2119 Male, age 80, both hemispheres 57.2
2558 Male, age 74, both hemispheres 55.4
Parvicellular reticular nuclei, medullary
nTPM: 57.8
2189 Female, age 91, both hemispheres 62.5
2181 Male, age 80, left hemisphere 56.1
2091 Female, age 85, both hemispheres 54.9
Peritrigeminal nucleus
nTPM: 61.2
2179 Male, age 61, both hemispheres 64.8
2136 Male, age 76, both hemispheres 63.4
2067 Female, age 85, both hemispheres 55.5
Prepositus hypoglossal nucleus
nTPM: 62.4
2855 Female, age 85, right hemisphere 64.8
2086 Male, age 80, both hemispheres 59.9
Spinal trigeminal nucleus, caudal
nTPM: 58.3
2390 Female, age 91, both hemispheres 61.4
2642 Male, age 74, both hemispheres 61.2
2312 Male, age 61, both hemispheres 58.4
2447 Male, age 76, both hemispheres 56.8
2308 Male, age 80, both hemispheres 53.8
Spinal trigeminal nucleus, interpolar
nTPM: 62.9
2066 Male, age 76, right hemisphere 70.7
2389 Female, age 91, both hemispheres 63.1
2386 Female, age 85, both hemispheres 61.5
2033 Male, age 80, both hemispheres 59.5
2625 Male, age 61, both hemispheres 59.5
Spinal vestibular nucleus
nTPM: 60.0
2806 Female, age 85, both hemispheres 63.2
2186 Female, age 91, both hemispheres 62.0
2384 Male, age 74, both hemispheres 61.2
2748 Male, age 76, both hemispheres 59.5
2780 Male, age 80, both hemispheres 58.0
2796 Male, age 61, both hemispheres 56.2
Ventral medullary reticular nucleus
nTPM: 60.0
2372 Male, age 61, both hemispheres 63.7
2060 Male, age 76, both hemispheres 56.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 60.0
1986 Male, age 76, both hemispheres 64.7
2741 Female, age 85, both hemispheres 61.7
2180 Male, age 61, both hemispheres 60.9
2302 Female, age 91, both hemispheres 58.7
2118 Male, age 80, both hemispheres 54.1

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 117.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 117.2
FF:10038-101F2 18-64 years, mixed 147.6
FF:10155-103A2 76 years, female 133.2
FF:10174-103C3 60 years, female 70.8

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 63.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 63.9
Samples: 4

Max nTPM: 75.0
Min nTPM: 53.4
Sample A Female 75.0
Sample B Female 65.5
Sample C Male 61.7
Sample D Male 53.4

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.1
74821970 Antisense, RP_060321_02_F08, Mouse strain C57BL/6J (56 days, male) 4.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.