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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:896.4 nTPM
GTEx:896.4 nTPM
FANTOM5:2098.9 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB004288
Squamous epithelial cells Medium

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 896.4
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 896.4
Samples: 156

Max nTPM: 1558.2
Min nTPM: 496.3
Std nTPM: 213.2
Median nTPM: 868.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 1558.2
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 1521.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1498.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 1431.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 1355.2
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 1351.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 1347.4
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 1325.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 1258.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 1250.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1240.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1237.7
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1214.4
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 1213.0
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 1199.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1196.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 1181.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 1174.7
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1154.6
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 1150.4
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 1148.3
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 1131.1
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1107.9
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1103.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1102.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1101.7
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1095.9
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1093.9
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1086.5
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1079.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 1072.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 1070.5
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1070.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 1059.5
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1058.9
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1057.4
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 1052.3
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1051.0
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 1049.6
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1044.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1037.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1017.7
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 1012.1
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1009.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 990.1
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 982.3
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 979.0
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 973.1
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 968.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 968.7
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 962.3
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 956.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 953.8
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 950.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 947.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 945.4
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 944.1
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 938.4
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 926.7
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 925.9
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 925.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 918.8
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 915.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 914.6
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 911.0
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 907.6
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 903.5
GTEX-14PKU-1326-SM-6871B 40-49 years, female 902.0
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 901.7
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 900.1
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 894.6
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 892.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 889.3
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 885.8
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 883.8
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 881.1
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 870.4
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 869.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 867.7
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 863.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 860.8
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 846.1
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 845.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 841.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 840.6
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 837.3
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 835.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 826.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 825.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 824.4
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 822.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 821.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 818.1
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 816.7
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 814.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 813.9
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 812.7
GTEX-QCQG-1226-SM-48U23 50-59 years, female 806.4
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 805.8
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 803.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 796.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 781.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 780.6
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 779.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 778.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 774.7
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 774.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 771.9
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 767.7
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 762.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 753.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 749.5
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 747.2
GTEX-11I78-2026-SM-5987C 50-59 years, female 742.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 741.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 740.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 738.2
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 736.9
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 735.5
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 735.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 732.1
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 723.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 722.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 717.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 716.1
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 708.3
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 703.8
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 703.8
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 695.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 695.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 687.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 685.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 684.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 680.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 677.5
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 665.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 664.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 661.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 648.3
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 646.0
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 645.9
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 642.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 630.4
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 620.7
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 618.4
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 612.3
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 612.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 607.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 602.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 594.2
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 585.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 585.1
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 564.2
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 561.1
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 547.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 496.3
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 2098.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 2098.9
FF:10204-103F6 68 years, female 2098.9

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.