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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:355.6 nTPM
FANTOM5:390.3 Scaled Tags Per Million
Pig:160.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA044708
Glial cells Not detected
Neuronal cells High

CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 355.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 355.6
Samples: 246

Max nTPM: 629.3
Min nTPM: 179.0
Std nTPM: 74.2
Median nTPM: 349.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 629.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 595.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 575.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 556.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 552.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 545.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 538.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 519.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 519.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 516.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 515.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 500.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 494.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 493.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 490.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 483.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 476.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 475.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 475.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 473.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 462.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 462.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 461.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 458.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 457.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 453.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 453.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 449.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 448.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 446.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 443.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 432.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 430.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 430.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 429.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 426.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 423.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 421.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 418.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 417.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 417.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 416.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 416.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 412.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 411.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 410.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 410.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 408.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 408.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 408.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 407.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 407.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 407.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 406.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 405.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 404.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 403.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 400.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 399.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 398.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 398.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 397.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 397.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 396.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 390.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 389.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 388.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 388.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 386.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 384.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 384.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 383.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 381.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 381.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 380.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 380.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 378.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 377.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 377.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 376.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 375.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 375.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 374.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 373.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 372.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 371.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 370.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 370.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 370.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 370.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 370.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 369.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 367.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 367.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 366.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 365.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 365.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 364.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 364.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 364.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 362.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 362.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 362.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 361.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 360.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 360.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 358.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 357.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 357.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 357.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 356.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 356.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 356.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 355.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 355.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 353.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 353.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 353.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 353.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 352.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 352.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 350.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 350.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 349.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 348.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 348.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 344.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 342.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 340.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 340.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 339.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 339.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 339.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 336.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 335.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 334.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 334.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 333.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 332.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 332.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 332.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 332.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 331.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 331.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 330.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 330.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 329.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 328.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 328.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 328.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 326.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 326.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 325.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 324.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 324.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 323.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 323.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 323.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 322.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 321.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 321.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 321.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 321.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 320.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 319.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 319.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 319.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 318.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 318.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 318.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 318.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 317.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 315.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 314.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 314.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 313.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 313.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 312.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 311.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 309.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 309.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 308.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 307.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 307.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 306.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 304.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 303.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 301.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 300.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 299.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 299.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 299.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 298.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 297.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 296.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 295.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 295.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 295.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 295.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 294.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 290.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 290.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 290.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 288.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 288.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 288.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 287.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 287.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 285.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 284.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 284.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 283.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 281.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 280.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 280.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 279.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 279.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 278.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 277.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 277.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 276.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 276.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 274.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 274.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 270.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 269.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 265.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 262.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 259.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 258.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 255.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 254.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 253.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 249.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 247.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 244.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 238.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 237.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 236.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 231.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 230.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 218.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 216.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 214.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 207.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 179.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 390.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 390.3
FF:10164-103B2 76 years, female 390.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 160.9
Pig sample Sample description nTPM
Caudate
nTPM: 160.9
Samples: 4

Max nTPM: 203.4
Min nTPM: 135.8
Sample A Female 139.2
Sample B Female 165.3
Sample C Male 203.4
Sample D Male 135.8

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