HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1806.3 nTPM
HPA:1806.3 nTPM
GTEx:1471.2 nTPM
FANTOM5:69.7 Scaled Tags Per Million
Pig:282.9 nTPM
Mouse:858.3 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050159
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1806.3
Sample id Sample description nTPM
Hippocampus
nTPM: 1806.3
1898 Male, age 80, left hemisphere 1846.7
2529 Female, age 94, left hemisphere 1831.5
1911 Female, age 85, right hemisphere 1798.2
2621 Female, age 67, right hemisphere 1798.1
2148 Female, age 91, left hemisphere 1784.5
1855 Male, age 76, left hemisphere 1778.9
Dentate gyrus
nTPM: 1790.4
2530 Female, age 94, left hemisphere 1848.5
2010 Male, age 76, both hemispheres 1802.2
2531 Female, age 67, both hemispheres 1790.9
2246 Female, age 85, both hemispheres 1775.2
1927 Female, age 91, both hemispheres 1766.9
2528 Male, age 74, both hemispheres 1758.8
Entorhinal gyrus
nTPM: 1791.9
2686 Male, age 75, right hemisphere 1835.0
2117 Female, age 91, right hemisphere 1809.5
1787 Male, age 76, left hemisphere 1790.7
1938 Female, age 85, left hemisphere 1784.0
2764 Male, age 80, right hemisphere 1776.6
2613 Female, age 94, left hemisphere 1755.6
Hippocampus, CA1
nTPM: 1781.7
2082 Female, age 91, right hemisphere 1797.3
1873 Female, age 85, both hemispheres 1792.1
2045 Male, age 76, both hemispheres 1783.1
2527 Male, age 74, both hemispheres 1776.9
2749 Male, age 80, left hemisphere 1759.0
Hippocampus, CA2
nTPM: 1787.6
1963 Male, age 80, left hemisphere 1810.3
2437 Female, age 94, left hemisphere 1793.1
2113 Female, age 91, right hemisphere 1789.2
1940 Female, age 85, left hemisphere 1788.1
1892 Male, age 76, both hemispheres 1787.0
2249 Male, age 74, both hemispheres 1757.8
Hippocampus, CA3
nTPM: 1776.9
1891 Female, age 85, both hemispheres 1811.8
1867 Male, age 76, both hemispheres 1807.4
2861 Female, age 67, both hemispheres 1804.6
2137 Male, age 80, left hemisphere 1761.9
2436 Male, age 74, both hemispheres 1738.2
2620 Female, age 94, left hemisphere 1737.4
Parahippocampal cortex
nTPM: 1780.9
2018 Male, age 76, both hemispheres 1842.8
2250 Female, age 67, right hemisphere 1802.3
1850 Male, age 80, both hemispheres 1786.9
2532 Female, age 72, left hemisphere 1780.4
1933 Female, age 85, both hemispheres 1778.8
2245 Female, age 91, both hemispheres 1778.7
1990 Female, age 91, right hemisphere 1777.6
2692 Male, age 74, both hemispheres 1765.3
2622 Female, age 67, right hemisphere 1761.7
2693 Female, age 94, both hemispheres 1734.7
Perirhinal gyrus
nTPM: 1782.6
1841 Female, age 85, right hemisphere 1808.7
1847 Female, age 91, left hemisphere 1793.2
1794 Male, age 80, right hemisphere 1779.0
2848 Male, age 76, right hemisphere 1767.4
2521 Female, age 94, right hemisphere 1764.8
Subiculum
nTPM: 1789.2
2042 Male, age 76, both hemispheres 1815.4
1977 Female, age 85, both hemispheres 1813.5
1901 Male, age 80, both hemispheres 1791.6
2729 Female, age 91, right hemisphere 1774.9
2438 Female, age 94, left hemisphere 1771.4
2619 Male, age 74, both hemispheres 1768.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1471.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1471.2
Samples: 197

Max nTPM: 3957.1
Min nTPM: 620.6
Std nTPM: 535.3
Median nTPM: 1346.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3957.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 3608.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 3252.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2991.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2731.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2657.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2644.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 2571.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 2540.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2502.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 2462.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.7
FF:10153-102I9 76 years, female 88.2
FF:10169-103B7 60 years, female 51.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 282.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 282.9
Samples: 4

Max nTPM: 409.1
Min nTPM: 180.4
Sample A Female 409.1
Sample B Female 245.0
Sample C Male 297.0
Sample D Male 180.4
Entorhinal cortex
nTPM: 262.7
Samples: 4

Max nTPM: 333.1
Min nTPM: 179.3
Sample A Female 230.7
Sample B Female 333.1
Sample C Male 307.7
Sample D Male 179.3
Subiculum
nTPM: 244.7
Samples: 4

Max nTPM: 387.8
Min nTPM: 174.7
Sample A Female 387.8
Sample B Female 222.4
Sample C Male 174.7
Sample D Male 194.0
Ventral hippocampus
nTPM: 240.2
Samples: 4

Max nTPM: 275.6
Min nTPM: 199.7
Sample A Female 263.4
Sample B Female 199.7
Sample C Male 275.6
Sample D Male 221.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 858.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 830.5
Samples: 4

Max nTPM: 913.8
Min nTPM: 790.8
Sample A Male 805.1
Sample B Male 812.4
Sample C Female 913.8
Sample D Female 790.8
Hippocampal formation
nTPM: 858.3
Samples: 4

Max nTPM: 978.3
Min nTPM: 745.8
Sample A Male 978.3
Sample B Male 745.8
Sample C Female 846.8
Sample D Female 862.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
69873283 Antisense, RP_050510_04_H10, Mouse strain C57BL/6J (56 days, male) 3.8

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