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RPS18
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1948.2 nTPM
HPA:1948.2 nTPM
GTEx:1740.5 nTPM
FANTOM5:98.0 Scaled Tags Per Million
Pig:393.9 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 1948.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 1850.8
2565 Male, age 75, midline 1912.1
1981 Female, age 72, midline 1902.6
2048 Male, age 55, midline 1842.0
2194 Female, age 79, both hemispheres 1799.9
2816 Male, age 47, midline 1797.4
Cervical spinal cord, dorsal horn
nTPM: 1862.2
2069 Male, age 47, both hemispheres 1929.6
2173 Female, age 72, unknown 1916.9
2296 Male, age 66, both hemispheres 1899.4
1877 Male, age 55, unknown 1865.6
2297 Male, age 75, both hemispheres 1796.3
2721 Male, age 90, both hemispheres 1765.3
Cervical spinal cord, ventral horn
nTPM: 1948.2
2480 Male, age 75, both hemispheres 2072.8
2809 Male, age 90, both hemispheres 2039.7
2098 Female, age 72, unknown 2019.8
2295 Male, age 66, both hemispheres 1905.0
2068 Male, age 55, unknown 1890.3
2820 Female, age 79, both hemispheres 1761.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1740.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1740.5
Samples: 159

Max nTPM: 3607.6
Min nTPM: 604.7
Std nTPM: 548.6
Median nTPM: 1681.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 3607.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 3343.2
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 3154.8
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 3063.8
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 2977.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 2928.7
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 2902.3
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 2834.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 2716.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 2706.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 2599.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 2569.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 2564.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 2525.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 2517.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 2462.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 2447.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 2396.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 2351.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 2335.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 2314.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 2311.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 2308.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 2292.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 2288.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 2280.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 2266.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 2266.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 2257.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 2215.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 2204.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 2193.6
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 2171.1
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 2111.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 2111.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 2101.2
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 2076.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 2074.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 2042.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 2035.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 2035.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 2005.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1997.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1987.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1985.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1967.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1962.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1957.3
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1955.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1945.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1934.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1927.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1924.4
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1920.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1913.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1904.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1902.0
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1894.7
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1888.6
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1878.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1863.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1850.8
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1833.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1814.2
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1791.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1783.2
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1772.6
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1770.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1770.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1764.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1763.9
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1759.5
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1751.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1740.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1711.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1709.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1690.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1689.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1683.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1681.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1681.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1673.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1666.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1658.0
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1653.6
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1652.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1651.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1649.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1629.5
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1619.2
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1613.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1594.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1589.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1574.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1571.7
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1567.0
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1564.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1546.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 1522.9
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1518.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1514.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1513.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1510.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1499.0
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1492.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1491.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1478.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1474.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1459.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1443.9
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 1422.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1403.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1401.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1393.6
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1376.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1374.0
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1368.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1359.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1356.8
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1355.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1349.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1341.4
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 1337.4
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1336.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1330.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1321.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1316.5
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 1307.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1293.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1256.1
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1245.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1223.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1217.4
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 1201.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1185.6
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1172.2
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 1151.5
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1148.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1140.7
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1137.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1120.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1111.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 1087.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 1075.3
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1060.5
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1052.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 1049.2
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1017.7
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1011.9
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1000.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 992.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 935.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 888.8
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 805.8
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 789.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 774.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 744.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 701.0
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 604.7
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 98.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 98.0
FF:10181-103D1 60 years, female 114.8
FF:10159-103A6 76 years, female 81.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 393.9
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 393.9
Samples: 4

Max nTPM: 610.1
Min nTPM: 256.3
Sample A Female 292.8
Sample B Female 416.3
Sample C Male 610.1
Sample D Male 256.3
Ventral spinal cord
nTPM: 330.0
Samples: 4

Max nTPM: 405.3
Min nTPM: 265.8
Sample A Female 265.8
Sample B Female 338.3
Sample C Male 405.3
Sample D Male 310.6

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