HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:124.0 nTPM
HPA:124.0 nTPM
GTEx:157.2 nTPM
FANTOM5:5.0 Scaled Tags Per Million
Pig:479.1 nTPM
Mouse:625.8 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047132
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 124.0
Sample id Sample description nTPM
Hippocampus
nTPM: 124.0
1898 Male, age 80, left hemisphere 127.2
2529 Female, age 94, left hemisphere 126.9
2621 Female, age 67, right hemisphere 125.9
1911 Female, age 85, right hemisphere 123.4
1855 Male, age 76, left hemisphere 120.3
2148 Female, age 91, left hemisphere 120.1
Dentate gyrus
nTPM: 123.9
2530 Female, age 94, left hemisphere 127.2
2010 Male, age 76, both hemispheres 125.4
2531 Female, age 67, both hemispheres 125.1
2246 Female, age 85, both hemispheres 122.4
2528 Male, age 74, both hemispheres 122.2
1927 Female, age 91, both hemispheres 121.0
Entorhinal gyrus
nTPM: 123.1
2686 Male, age 75, right hemisphere 127.2
1787 Male, age 76, left hemisphere 125.5
2117 Female, age 91, right hemisphere 123.3
2764 Male, age 80, right hemisphere 122.0
1938 Female, age 85, left hemisphere 120.8
2613 Female, age 94, left hemisphere 120.1
Hippocampus, CA1
nTPM: 122.3
2749 Male, age 80, left hemisphere 124.4
2527 Male, age 74, both hemispheres 123.1
1873 Female, age 85, both hemispheres 122.7
2082 Female, age 91, right hemisphere 121.3
2045 Male, age 76, both hemispheres 120.2
Hippocampus, CA2
nTPM: 122.7
1963 Male, age 80, left hemisphere 127.1
2437 Female, age 94, left hemisphere 125.2
1892 Male, age 76, both hemispheres 121.9
2113 Female, age 91, right hemisphere 121.6
2249 Male, age 74, both hemispheres 120.6
1940 Female, age 85, left hemisphere 119.4
Hippocampus, CA3
nTPM: 123.1
2861 Female, age 67, both hemispheres 126.8
1867 Male, age 76, both hemispheres 124.9
1891 Female, age 85, both hemispheres 123.7
2436 Male, age 74, both hemispheres 121.7
2137 Male, age 80, left hemisphere 121.3
2620 Female, age 94, left hemisphere 120.0
Parahippocampal cortex
nTPM: 121.1
2018 Male, age 76, both hemispheres 126.8
1990 Female, age 91, right hemisphere 122.4
1850 Male, age 80, both hemispheres 122.3
2622 Female, age 67, right hemisphere 121.8
1933 Female, age 85, both hemispheres 121.1
2692 Male, age 74, both hemispheres 120.6
2532 Female, age 72, left hemisphere 120.5
2250 Female, age 67, right hemisphere 120.2
2245 Female, age 91, both hemispheres 118.4
2693 Female, age 94, both hemispheres 117.1
Perirhinal gyrus
nTPM: 121.3
1794 Male, age 80, right hemisphere 124.1
1847 Female, age 91, left hemisphere 122.3
1841 Female, age 85, right hemisphere 120.7
2848 Male, age 76, right hemisphere 120.6
2521 Female, age 94, right hemisphere 119.0
Subiculum
nTPM: 123.6
1977 Female, age 85, both hemispheres 125.9
2042 Male, age 76, both hemispheres 125.2
2619 Male, age 74, both hemispheres 124.1
1901 Male, age 80, both hemispheres 122.4
2438 Female, age 94, left hemisphere 122.4
2729 Female, age 91, right hemisphere 121.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 157.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 157.2
Samples: 197

Max nTPM: 344.9
Min nTPM: 59.3
Std nTPM: 57.6
Median nTPM: 146.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 344.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 323.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 311.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 306.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 298.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 297.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 294.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 290.3
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 289.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 280.8
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 266.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 5.0
FF:10169-103B7 60 years, female 6.2
FF:10153-102I9 76 years, female 3.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 479.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 479.1
Samples: 4

Max nTPM: 664.7
Min nTPM: 318.4
Sample A Female 664.7
Sample B Female 417.5
Sample C Male 515.8
Sample D Male 318.4
Entorhinal cortex
nTPM: 386.3
Samples: 4

Max nTPM: 485.1
Min nTPM: 277.3
Sample A Female 348.3
Sample B Female 485.1
Sample C Male 434.5
Sample D Male 277.3
Subiculum
nTPM: 385.2
Samples: 4

Max nTPM: 537.3
Min nTPM: 301.6
Sample A Female 537.3
Sample B Female 366.1
Sample C Male 301.6
Sample D Male 335.7
Ventral hippocampus
nTPM: 409.3
Samples: 4

Max nTPM: 479.2
Min nTPM: 341.8
Sample A Female 393.3
Sample B Female 341.8
Sample C Male 479.2
Sample D Male 422.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 625.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 563.7
Samples: 4

Max nTPM: 619.9
Min nTPM: 521.4
Sample A Male 580.5
Sample B Male 521.4
Sample C Female 619.9
Sample D Female 532.8
Hippocampal formation
nTPM: 625.8
Samples: 4

Max nTPM: 690.4
Min nTPM: 546.9
Sample A Male 690.4
Sample B Male 630.7
Sample C Female 546.9
Sample D Female 635.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
69112407 Antisense, RP_050324_02_G08, Mouse strain C57BL/6J (56 days, male) 5.0

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