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RPS28
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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:240.0 nTPM
GTEx:240.0 nTPM
FANTOM5:12.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA047132
Squamous epithelial cells Medium


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 240.0
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 240.0
Samples: 156

Max nTPM: 607.1
Min nTPM: 108.6
Std nTPM: 75.6
Median nTPM: 225.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 607.1
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 502.3
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 466.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 423.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 421.2
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 408.0
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 403.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 392.4
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 376.2
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 358.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 356.5
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 343.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 342.8
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 341.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 335.6
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 334.8
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 332.0
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 326.8
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 322.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 318.0
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 309.6
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 307.1
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 306.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 305.7
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 304.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 301.3
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 300.2
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 297.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 297.5
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 295.2
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 293.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 290.7
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 288.2
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 285.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 282.3
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 281.1
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 280.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 273.5
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 271.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 269.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 269.0
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 267.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 265.8
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 264.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 262.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 262.3
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 261.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 261.4
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 260.3
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 260.2
GTEX-11I78-2026-SM-5987C 50-59 years, female 260.1
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 259.0
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 257.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 257.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 256.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 255.2
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 255.1
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 254.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 249.4
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 246.5
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 245.3
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 244.8
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 239.4
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 239.3
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 238.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 236.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 234.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 233.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 232.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 231.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 231.1
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 229.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 229.1
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 228.2
GTEX-QCQG-1226-SM-48U23 50-59 years, female 227.3
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 226.4
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 226.0
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 225.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 225.1
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 225.0
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 224.6
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 224.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 223.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 223.4
GTEX-14PKU-1326-SM-6871B 40-49 years, female 222.2
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 221.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 220.6
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 220.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 219.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 217.6
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 216.8
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 216.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 215.3
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 213.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 212.8
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 208.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 208.3
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 207.8
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 207.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 206.0
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 206.0
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 205.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 205.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 204.7
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 204.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 203.6
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 202.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 201.2
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 201.1
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 200.9
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 200.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 200.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 198.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 198.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 198.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 197.5
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 197.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 194.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 192.8
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 191.4
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 187.7
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 186.7
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 186.4
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 186.1
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 183.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 183.3
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 183.3
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 183.2
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 180.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 178.5
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 177.9
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 176.2
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 175.7
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 174.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 173.5
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 170.3
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 166.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 165.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 165.6
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 162.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 157.7
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 156.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 147.7
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 146.8
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 141.3
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 141.2
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 140.4
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 139.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 135.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 135.2
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 133.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 125.7
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 124.1
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 117.1
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 114.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 108.6
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 12.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 12.0
FF:10204-103F6 68 years, female 12.0

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