HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:291.2 nTPM
HPA:291.2 nTPM
GTEx:227.6 nTPM
FANTOM5:116.7 Scaled Tags Per Million
Mouse:508.4 nTPM
Allen mouse:17.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041394Antibody CAB016209
Glial cells LowLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 291.2
Sample id Sample description nTPM
Hippocampus
nTPM: 278.3
1898 Male, age 80, left hemisphere 303.8
1855 Male, age 76, left hemisphere 277.4
2529 Female, age 94, left hemisphere 277.4
2621 Female, age 67, right hemisphere 273.8
1911 Female, age 85, right hemisphere 269.5
2148 Female, age 91, left hemisphere 267.9
Dentate gyrus
nTPM: 276.1
1927 Female, age 91, both hemispheres 289.5
2010 Male, age 76, both hemispheres 283.9
2246 Female, age 85, both hemispheres 274.8
2528 Male, age 74, both hemispheres 274.6
2530 Female, age 94, left hemisphere 270.7
2531 Female, age 67, both hemispheres 262.9
Entorhinal gyrus
nTPM: 274.0
2764 Male, age 80, right hemisphere 283.7
1938 Female, age 85, left hemisphere 280.2
1787 Male, age 76, left hemisphere 274.9
2117 Female, age 91, right hemisphere 270.5
2686 Male, age 75, right hemisphere 268.7
2613 Female, age 94, left hemisphere 266.0
Hippocampus, CA1
nTPM: 284.5
2749 Male, age 80, left hemisphere 309.3
2527 Male, age 74, both hemispheres 288.7
1873 Female, age 85, both hemispheres 281.7
2045 Male, age 76, both hemispheres 274.7
2082 Female, age 91, right hemisphere 268.3
Hippocampus, CA2
nTPM: 285.2
1892 Male, age 76, both hemispheres 297.3
2249 Male, age 74, both hemispheres 297.3
1963 Male, age 80, left hemisphere 296.6
2437 Female, age 94, left hemisphere 279.0
1940 Female, age 85, left hemisphere 270.8
2113 Female, age 91, right hemisphere 270.1
Hippocampus, CA3
nTPM: 280.6
2436 Male, age 74, both hemispheres 303.1
2137 Male, age 80, left hemisphere 291.6
1867 Male, age 76, both hemispheres 290.1
1891 Female, age 85, both hemispheres 276.0
2620 Female, age 94, left hemisphere 261.3
2861 Female, age 67, both hemispheres 261.2
Parahippocampal cortex
nTPM: 277.5
1850 Male, age 80, both hemispheres 293.8
1933 Female, age 85, both hemispheres 284.7
1990 Female, age 91, right hemisphere 283.1
2250 Female, age 67, right hemisphere 282.9
2018 Male, age 76, both hemispheres 279.0
2693 Female, age 94, both hemispheres 275.3
2245 Female, age 91, both hemispheres 274.1
2532 Female, age 72, left hemisphere 270.3
2692 Male, age 74, both hemispheres 267.6
2622 Female, age 67, right hemisphere 264.1
Perirhinal gyrus
nTPM: 291.2
1847 Female, age 91, left hemisphere 309.3
1794 Male, age 80, right hemisphere 299.8
1841 Female, age 85, right hemisphere 291.8
2521 Female, age 94, right hemisphere 278.6
2848 Male, age 76, right hemisphere 276.6
Subiculum
nTPM: 277.1
1901 Male, age 80, both hemispheres 286.7
1977 Female, age 85, both hemispheres 284.4
2619 Male, age 74, both hemispheres 274.4
2438 Female, age 94, left hemisphere 273.8
2042 Male, age 76, both hemispheres 271.7
2729 Female, age 91, right hemisphere 271.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 227.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 227.6
Samples: 197

Max nTPM: 682.5
Min nTPM: 102.7
Std nTPM: 70.6
Median nTPM: 218.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 682.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 444.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 435.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 416.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 414.1
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 391.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 386.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 373.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 370.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 336.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 330.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 116.7
FF:10169-103B7 60 years, female 144.3
FF:10153-102I9 76 years, female 89.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 508.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 470.9
Samples: 4

Max nTPM: 514.5
Min nTPM: 442.4
Sample A Male 442.4
Sample B Male 452.6
Sample C Female 514.5
Sample D Female 474.0
Hippocampal formation
nTPM: 508.4
Samples: 4

Max nTPM: 583.2
Min nTPM: 462.0
Sample A Male 583.2
Sample B Male 462.0
Sample C Female 474.6
Sample D Female 513.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.7
576416 Antisense, RP_040826_01_G02, Mouse strain C57BL/6J (56 days, male) 20.8
1159 Antisense, RP_Baylor_253881, Mouse strain C57BL/6J (56 days, male) 14.6
1158 Antisense, RP_Baylor_253881, Mouse strain C57BL/6J (56 days, male) 10.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.